催化过程中的扭曲:埃舍里希亚大肠杆菌的替代形态为硫素减少酶
B W Lennon1, C H Williams, M L Ludwig
1Biophysics Research Division, Department of Biological Chemistry, University of Michigan, Ann Arbor, MI 48109, USA.
概括
埃舍里希亚大肠杆菌的硫素减少酶 (TrxR) 经历域重组,以减少和再氧化黄氨酸二核酸 (FAD). 一个3.0安格斯特罗姆的结构揭示了一个flavin-reducing形状,使NADPH减少FAD.
科学领域:
- 生物化学 生物化学
- 结构生物学 结构生物学
- 酶学 是一种酶学.
背景情况:
- 来自大肠杆菌的硫素还原酶 (TrxR) 使用一种黄胺二核酸 (FAD) 辅因子.
- 酶活性涉及循环减少和FAD的再氧化,依赖于域重组.
研究的目的:
- 阐明大肠杆菌中黄素减少的结构基础TrxR.
- 描述大肠杆菌TrxR.的减少黄素的形状.
主要方法:
- 在3.0安格斯特罗姆分辨率的X射线晶体学.
- 不同酶形状的结构比较.
主要成果:
- 确定了大肠杆菌TrxR的flavin-reducing形状的结构.
- 这种构造允许通过NADPH减少FAD,并通过 thioredoxin氧化dithiol.
- 与另一个形状的比较揭示了胺核酸结合域的67度旋转,被描述为"球和"运动.
结论:
- 域重组对于大肠杆菌TrxR.的催化循环至关重要.
- 鉴定到的减少黄素的形状为减少FAD和随后的酶反应的机制提供了洞察力.
相关概念视频
Bacterial Flora of the Large Intestine
The gut microbiome is formed by a vast and diverse community of bacteria that colonizes our large intestine. These bacteria start residing in the gut from birth and continue diversifying throughout life, influenced by factors such as diet, lifestyle, and stress. The gut bacterial community also includes bacteria from food and those that enter the colon through the anus.
The normal gut flora of the colon plays a critical role in generating essential vitamins such as vitamins K, B5, and B7.
The normal gut flora of the colon plays a critical role in generating essential vitamins such as vitamins K, B5, and B7.
Amino Acid Catabolism
Microorganisms rely on proteins as an essential carbon and energy source, particularly in environments with limited polysaccharides or lipids. However, proteins are too large to cross the plasma membrane unaided, necessitating enzymatic degradation. Microbes secrete extracellular proteases and peptidases that hydrolyze proteins into peptides, which can then be transported across the membrane. Once inside the cell, intracellular proteases degrade these peptides into free amino acids, which...
Sulfur Assimilation
Sulfur is an essential element in biological systems, contributing to synthesizing key biomolecules, including amino acids such as cysteine and methionine, and cofactors such as coenzyme A and biotin. Microorganisms primarily assimilate sulfur as sulfate (SO₄²⁻) from the environment, which must undergo a series of biochemical transformations before it can be incorporated into cellular components. As sulfate is highly oxidized, it must undergo assimilatory sulfate reduction to become...
Microbes in the Production of Fermented Foods
Lactic acid bacteria (LAB) and molds are instrumental in fermenting plant-based foods to enhance preservation and ensure year-round availability. These microbial processes convert plant carbohydrates into organic acids and other metabolites that inhibit spoilage organisms and contribute to the sensory qualities of the final product.In sauerkraut production, cabbage goes through a microbial succession that starts with cocci such as Leuconostoc mesenteroides. These microbes begin fermentation by...
Microbiota of the Stomach and Small Intestine
The human gastrointestinal (GI) tract is characterized by distinct physicochemical conditions that shape its microbial communities. Among these, the stomach presents a particularly challenging environment for microbial colonization due to its highly acidic pH, ranging from 1 to 3. This extreme acidity effectively limits microbial density. However, certain acid-tolerant microorganisms are capable of surviving in this niche. Notably, Helicobacter pylori can colonize the gastric mucosa,...
Microbiota Modulation by Antibiotics
Antibiotics have revolutionized modern medicine by saving countless lives from bacterial infections. However, their widespread use has inadvertently harmed the delicate balance of the human gut microbiota. The gut microbiota, a complex community of bacteria, archaea, viruses, and fungi, plays a vital role in regulating metabolism, immune responses, and maintaining intestinal health. Antibiotics, especially broad-spectrum types, disrupt this ecosystem by eradicating both harmful and beneficial...


