人类基因组的SNP地图由减少表示射击枪测序生成
D Altshuler1, V J Pollara, C R Cowles
1Whitehead Institute/MIT Center for Genome Research, Cambridge, Massachusetts 02142, USA.
Nature
|October 12, 2000
概括
减少表示射门枪 (RRS) 测序是创建单核酸多态 (SNP) 地图的强大方法. 这种方法加速了对了解疾病和人口历史至关重要的遗传变异的发现.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 人口遗传学 人口遗传学
背景情况:
- 单核酸多态 (SNP) 是基因组变异的主要来源,为疾病基因跟踪和人口史提供高分辨率.
- 建议使用3万-500万个SNP的密集地图扫描人类基因组,以识别与常见疾病相关的单元类型.
研究的目的:
- 描述一种新且高效的方法,即减少表示射门枪 (RRS) 测序,用于创建SNP地图.
- 为了证明RRS测序在发现大量人类SNP中的实用性.
主要方法:
- 减少表示射门枪 (RRS) 测序涉及从多个个体重新采样特定的基因组子集.
- 序列使用高精度SNP检测算法进行比较.
- 与可用的基因组序列对齐可以提高SNP产量,并提供地图位置.
主要成果:
- 该研究描述了用于SNP地图创建的RRS测序方法.
- 使用RRS测序发现了47172个人类SNP.
- 通过这些方法,SNP联盟已经确定了总共148,459个SNP.
结论:
- RRS测序是一种快速,廉价和有效的方法,用于构建各种物种的SNP地图.
- 通过RRS发现的SNP为大规模的基因定型和遗传研究提供了显著的优势.
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