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人类基因组序列变异的地图,包含142万个单核酸多态
R Sachidanandam1, D Weissman, S C Schmidt
1Cold Spring Harbor, New York 11724, USA.
现在可以获得人类基因组中142万个单核酸多态 (SNP) 的综合地图. 这种高密度SNP地图有助于理解遗传变异和识别用于医学应用的基因.
科学领域:
- 基因组学就是基因组学.
- 人类遗传学 人类遗传学
- 生物信息学是一种生物信息学.
背景情况:
- 单核酸多态 (SNP) 对于理解人类遗传多样性至关重要.
- 之前的SNP发现工作已经产生了大量但分散的数据集.
- 整合这些数据集对于全面的基因组视图至关重要.
研究的目的:
- 在人类基因组中创建单核酸多态 (SNP) 的高密度地图.
- 将所有公开可用的SNP数据与基因组特征 (如基因) 整合起来.
- 为医疗目的提供哈普洛型分析和基因发现的资源.
主要方法:
- 来自SNP联盟和国际人类基因组测序联盟的数据汇编.
- 将SNP数据与公开可用的基因和基因组特征注释集成.
- 分析SNP分布和与外来地区的距离.
主要成果:
- 一张有142万个SNP的地图,平均密度为每1.9千基每1个SNP.
- 与基因的SNP的整合,与60,000个SNP在外体和85%的外体在SNP的5kB以内.
- 证明全基因组的可变核酸多样性,与人口遗传学模型相一致.
结论:
- 高密度SNP地图是基因组研究的宝贵公共资源.
- 这张地图有助于定义人类基因组中的单元型变异.
- 该资源预计将有助于识别与人类疾病诊断和治疗相关的基因.
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