核糖体基转移酶可以承受假定催化核酸的突变
N Polacek1, M Gaynor, A Yassin
1Center for Pharmaceutical Biotechnology (MC 870), University of Illinois, Chicago, Illinois 60607, USA.
Nature
|May 25, 2001
概括
蛋白质合成依赖于核糖体内的键形成. 这项研究发现,突变的关键RNA残留物没有显著改变基转移酶活性,这表明核糖体主要定位基质,而不是催化反应.
科学领域:
- 分子生物学分子生物学
- 生物化学 生物化学
- 结构生物学 结构生物学
背景情况:
- 键的形成是蛋白质合成的核心,发生在核糖体的基转移酶中心.
- 50S核糖体子单元的活性部位缺乏蛋白质,表明RNA的催化作用 (核糖酶).
- 在23S核糖体RNA中的氨酸残留物A2451被提议作为一个关键的催化残留物.
研究的目的:
- 为了研究A2451和G2447在核糖体RNA (rRNA) 键形成催化中的作用.
- 测试特定的rRNA核酸对基转移酶活性至关重要的假设.
主要方法:
- 在体外遗传学中,在23SrRNA中产生突变.
- 测试用于测量突变的核糖体子单元中的类转移酶活性.
- 对大肠杆菌Escherichia coli的大型核糖体子单元的分析.
主要成果:
- 在A2451的突变并没有废除,但保留了显著的基转移酶活性.
- 在G2447的突变也显示了实质性的转化活性.
- 这些假定催化残留物的变化并没有严重影响键形成的速度.
结论:
- 核糖体似乎主要通过基质定位来促进转化,而不是通过化学催化.
- 在rRNA中A2451的催化作用可能比以前认为的不那么关键.
- 蛋白质合成中的核糖体RNA的功能可能更多地依赖于结构组织而不是直接的化学催化.
更多相关视频
09:04Studying Ribonucleotide Incorporation: Strand-specific Detection of Ribonucleotides in the Yeast Genome and Measuring Ribonucleotide-induced Mutagenesis
Published on: July 26, 2018
06:18Measurement of Specific Mycobacterial Mistranslation Rates with Gain-of-function Reporter Systems
Published on: April 26, 2019
相关概念视频
Mismatch Repair
Overview
Translesion DNA Polymerases
Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
Transfer RNA Synthesis
One of the unique features of tRNA is the presence of modified bases. In some tRNAs, modified bases account for nearly 20% of the total bases in the molecule. Altogether, these unusual bases protect the tRNA from enzymatic degradation by RNases.
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
Improving Translational Accuracy
Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
Mismatch Repair
Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
Mutations in Microorganisms
Mutations are heritable changes in an organism’s genome involving alterations in the base sequence of DNA or RNA. These changes can influence cellular processes and phenotypic traits, potentially transforming the unaltered wild type into a mutant form. Such changes, termed forward mutations, are pivotal in shaping the genetic diversity of organisms.RNA viruses exhibit the highest mutation rates due to the absence of robust proofreading mechanisms during genome replication. In contrast,...
