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相关概念视频

Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The Proteasome02:18

The Proteasome

Eukaryotic cells can degrade proteins through several pathways. One of the most important amongst these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. A series of enzymes carry out the ubiquitination of the target proteins - E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3...
Regulated Protein Degradation02:58

Regulated Protein Degradation

It is vital to regulate the activity of enzymatic as well as non-enzymatic proteins inside the cell. This can be achieved either through creating a balance between their rate of synthesis and degradation or regulating the intrinsic activity of the protein. Both these regulation mechanisms play an essential role in the normal functioning of cells.
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Anaphase Promoting Complex00:50

Anaphase Promoting Complex

The stepwise destruction of specific proteins is necessary for the progression and completion of the cell cycle. Such proteins are ubiquitinated by ubiquitin ligases and then subsequently destroyed by the proteasome. The SCF (Skp1/Cullin/F-box) and the anaphase-promoting complex (APC) are two important ubiquitin ligases involved in cell cycle progression. While SCF is active throughout the cell cycle, APC gets activated during metaphase to anaphase transition. Cdc20 or Cdh1 binds to APC and...
The Proteasome01:13

The Proteasome

Eukaryotic cells can degrade proteins through several pathways. One of the most important among these is the ubiquitin-proteasome pathway. It helps the cell eliminate the misfolded, damaged, or unwarranted cytoplasmic proteins in a highly specific manner.
In this pathway, the target proteins are first tagged with small proteins called ubiquitin. This involves participation of a series of enzymes including— E1 (ubiquitin-activating enzyme), E2 (ubiquitin-conjugating enzyme), and E3 (ubiquitin...

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相关实验视频

Updated: Jun 23, 2026

In Vitro Analysis of E3 Ubiquitin Ligase Function
06:06

In Vitro Analysis of E3 Ubiquitin Ligase Function

Published on: May 14, 2021

通过SCFCdc4无基因化酶对依赖基质的选择和定向的结构基础.

Stephen Orlicky1, Xiaojing Tang, Andrew Willems

  • 1Program in Molecular Biology and Cancer, Samuel Lunenfeld Research Institute, Mount Sinai Hospital, 600 University Avenue, M5G 1X5, Toronto, Ontario, Canada.

Cell
|January 30, 2003
PubMed
概括

无处不在的系统精确地消除了细胞循环调节者,如Sic1. 研究人员发现,Cdc4

科学领域:

  • * 分子生物学 * 分子生物学
  • * 细胞生物学 细胞生物学
  • * 生物化学 * 生物化学

背景情况:

  • *细胞循环的进展依赖于通过ubiquitin系统调节的蛋白质降解.
  • * 循环素依赖激酶 (CDK) 抑制剂,如Sic1,是降解的关键目标.
  • * SCF ((Cdc4) 泛基因酶复合体针对Sic1进行泛基因化和降解.

研究的目的:

  • *为了阐明Sic1识别和Sic1识别的分子机制,以及SCF (Cdc4) 通过Sic1识别和Ubiquitination.
  • * 了解Sic1酸化在与Cdc4.4结合中的作用.
  • * 调查Sic1和Cdc4的结构特征如何影响基质识别.

主要方法:

  • *X射线结晶学测定Skp1-Cdc4复合体与脂结合的结构.
  • * 生物化学测定以评估结合亲缘关系和无处不在率.
  • * 蛋白质工程来修改Cdc4的基质特异性.

主要成果:

  • *一个核心Cdc4-phosphodegron (CPD) 动图 (Leu-Leu-pThr-Pro) 与Cdc4.4的WD40螺旋域结合.
  • *Sic1含有多个低亲和度的CPD位点,其结构与Cdc4结合位点不一致.

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Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates
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Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates

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Screening Traditional Chinese Medicine Compounds for Inhibiting UCHL3 Activity Based on Molecular Docking and Deubiquitinating Enzyme Probe Technology
10:25

Screening Traditional Chinese Medicine Compounds for Inhibiting UCHL3 Activity Based on Molecular Docking and Deubiquitinating Enzyme Probe Technology

Published on: November 22, 2024

相关实验视频

Last Updated: Jun 23, 2026

In Vitro Analysis of E3 Ubiquitin Ligase Function
06:06

In Vitro Analysis of E3 Ubiquitin Ligase Function

Published on: May 14, 2021

Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates
09:47

Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates

Published on: May 10, 2022

Screening Traditional Chinese Medicine Compounds for Inhibiting UCHL3 Activity Based on Molecular Docking and Deubiquitinating Enzyme Probe Technology
10:25

Screening Traditional Chinese Medicine Compounds for Inhibiting UCHL3 Activity Based on Molecular Docking and Deubiquitinating Enzyme Probe Technology

Published on: November 22, 2024

  • * 重新设计的Cdc4具有较低的特异性,可使较少酸化的Sic1无处不在.
  • 结论:

    • *SCF的Sic1识别 (Cdc4) 涉及多个低亲和位点的平衡结合模式.
    • * 一个用于Sic1识别的酸化值是由绑定动态解释的.
    • *了解这种机制,可以了解细胞循环控制和蛋白质降解途径.