在玉米,小鼠和人类中调查的基因表达的遗传学
Eric E Schadt1, Stephanie A Monks, Thomas A Drake
1Rosetta Inpharmatics, LLC, 12040 115th Avenue N.E., Kirkland, Washington 98034, USA. eric_schadt@merck.com
Nature
|March 21, 2003
概括
这项研究揭示了与小鼠肥胖相关的基因表达模式,确定了由不同的遗传位置控制的两个不同的亚型. 这些发现提供了更仔细的了解复杂特征背后的生化过程.
科学领域:
- 遗传学 是一个遗传学.
- 系统生物学 系统生物学
- 基因组学就是基因组学.
背景情况:
- 基因表达量化特征位点 (eQTL) 映射通常是基因特异性的.
- 转录丰度与经典定量特征相关,并用于识别疾病易感位置.
- 之前的研究已经为模型生物中的基因表达调节提供了全基因组的见解.
研究的目的:
- 通过将基因表达值视为定量特征,对跨物种的转录组进行全面的遗传查.
- 识别与肥胖等复杂特征相关的基因表达模式.
- 研究不同肥胖亚型的遗传控制.
主要方法:
- 在小鼠,植物和人类中对转录组进行全基因组基因查.
- 基因表达值作为定量特征的分析.
- 基因表达定量特征位置 (eQTLs) 的映射.
主要成果:
- 与肥胖相关的显著基因表达模式在小鼠交叉体验中被确定.
- 观察到两种不同的肥胖亚型.
- 发现这些肥胖亚型是由不同的遗传位置调节的.
结论:
- 将转录丰富性视为定量特征提供了比经典特征更接近细胞生化过程的视图.
- 基因表达特征分析可以揭示复杂疾病的不同亚型.
- 不同的基因位置控制着不同的肥胖亚型,突出显示了其遗传结构的复杂性.
相关概念视频
What is Gene Expression?
Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Chromatin Position Affects Gene Expression
Chromatin is the massive complex of DNA and proteins packaged inside the nucleus. The complexity of chromatin folding and how it is packaged inside the nucleus greatly influences access to genetic information. Generally, the nucleus' periphery is considered transcriptionally repressive, while the cell's interior is considered a transcriptionally active area.
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the timing and level of...
Topologically Associated Domains (TADs)
The 3-dimensional positioning of chromatin in the nucleus influences the timing and level of...
Combinatorial Gene Control
Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
Genetic Screens
Genetic screens are tools used to identify genes and mutations responsible for phenotypes of interest. Genetic screens help identify individuals or a group of people at risk of developing genetic diseases and help them with early intervention, targeted therapy, and reproductive options.
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which result in visible changes...
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which result in visible changes...
Reporter Genes
Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
Commonly used reporter...
Commonly used reporter...
What is Gene Expression?
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is comprised of nucleotides and proteins are comprised of amino acids, a mediator is required to convert the information encoded in DNA into proteins. This mediator is the messenger RNA (mRNA). mRNA copies the blueprint from DNA by a process called transcription. In eukaryotes, transcription occurs in the nucleus by complementary base-pairing with the DNA template. The mRNA is then processed and...


