通过六氧化核酸d ((TG4T) 形成平行链四重复的NMR研究
F Aboul-ela1, A I Murchie, D M Lilley
1Department of Biochemistry, University, Dundee, UK.
Nature
|November 19, 1992
概括
富含关氨酸的DNA形成复杂的结构,如四重复,对端粒和免疫功能至关重要. 这项研究揭示了平行链瓜四重复的高分辨率结构,为DNA折叠提供了新的见解.
科学领域:
- 分子生物学分子生物学
- 生物化学 生物化学
- 结构生物学 结构生物学
背景情况:
- 富含关氨酸的核酸形成复杂的结构,包括折叠式和平行链式四重复.
- 这些结构与染色体端粒和免疫球蛋白类别切换有关.
- 与结合的瓜四对这些DNA和RNA结构至关重要.
研究的目的:
- 为了研究与离子复合的六二核酸d ((TG4T) 的溶液结构.
- 为了确定一个平行链的瓜四重复的高分辨率特征.
- 为了比较平行链形式与折叠式形式的结构特征.
主要方法:
- 核磁共振 (NMR) 光谱被用来研究DNA复合体.
- 分析了d ((TG4T) 六二核酸的溶液结构.
- 考虑了缓冲条件和序列效应与结构异构的关系.
主要成果:
- 观察到一个平行链四重复结构的形成.
- 这种结构的特点是基基的联基.
- 与折叠形式相比,平行链形式呈现出不同的结构特征,核酸构造类似于B型DNA.
结论:
- 该研究提供了高分辨率的结构数据,用于溶液中的平行链瓜四重复.
- 观察到的结构与先前描述的折叠背形状有很大的不同.
- 这些发现有助于理解瓜丰富的序列在生物系统中的多样性结构作用.
更多相关视频
12:47Nuclear Magnetic Resonance Spectroscopy for the Identification of Multiple Phosphorylations of Intrinsically Disordered Proteins
Published on: December 27, 2016
09:37Preparation of Fungal and Plant Materials for Structural Elucidation Using Dynamic Nuclear Polarization Solid-State NMR
Published on: February 12, 2019
相关概念视频
Nuclear Magnetic Resonance (NMR): Overview
Nuclear magnetic resonance (NMR) is a phenomenon exhibited by certain nuclei that can absorb characteristic radio frequency radiation under certain conditions. NMR has been extensively applied in molecular spectroscopy and medical diagnostic imaging. In both these applications, the molecule or subject under study is placed in a magnetic field and irradiated with radio frequency energy.
NMR spectroscopy generates a spectrum where the characteristic absorption frequencies of the sample are...
NMR spectroscopy generates a spectrum where the characteristic absorption frequencies of the sample are...
¹H NMR: Complex Splitting
A proton M that is coupled to a proton X results in doublet signals for M. However, NMR-active nuclei can be simultaneously coupled to more than one nonequivalent nucleus. When M is coupled to a second proton A, such as in styrene oxide, each peak in the doublet is split into another doublet.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
Carbon-13 (¹³C) NMR: Overview
Carbon-13 is a naturally occurring NMR-active isotope of carbon with a low natural abundance of 1.1%. In contrast, carbon-12 is the most abundant isotope of carbon with zero nuclear spin. Therefore, it is NMR inactive. The gyromagnetic ratio of carbon-13 is smaller than that of protons. As a result, carbon-13 resonance is about 6000 times weaker than proton resonance. For a given magnetic field strength, the resonance frequency of carbon-13 is about one-fourth of the resonance frequency for...
Two-Dimensional (2D) NMR: Overview
The 1D NMR spectrum of large and complex molecules like natural products has complicated splitting patterns and overlapping signals, which can be easily interpreted using 2-dimensional (2D) NMR. Unlike 1D NMR, 2D NMR has two frequency axes that provide the coupling information between the nucleus A and nucleus B in a molecule. The process from which 2D spectra are obtained has four steps.
The first step is the preparation period, during which nucleus A is excited with a radiofrequency pulse.
The first step is the preparation period, during which nucleus A is excited with a radiofrequency pulse.
NMR Spectroscopy: Spin–Spin Coupling
The spin state of an NMR-active nucleus can have a slight effect on its immediate electronic environment. This effect propagates through the intervening bonds and affects the electronic environments of NMR-active nuclei up to three bonds away; occasionally, even farther. This phenomenon is called spin–spin coupling or J-coupling. Coupling interactions are mutual and result in small changes in the absorption frequencies of both nuclei involved. While nuclei of the same element are involved in...
¹H NMR of Conformationally Flexible Molecules: Variable-Temperature NMR
The axial and equatorial protons in cyclohexane can be distinguished by performing a variable-temperature NMR experiment. In this process, except for one proton, the remaining eleven protons are replaced by deuterium. The deuterium substitution avoids the possible peak splitting caused by the spin-spin coupling between the adjacent protons. The remaining proton flips between the axial and equatorial positions.
