通过核酸胺体对联体结合的化解离子
Edward J Merino1, Kevin M Weeks
1Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599-3290, USA.
Journal of the American Chemical Society
|October 9, 2003
概括
研究人员开发了一种新的光传感器,使用一种ATP结合的胺体. 通过光的变化,这种体检测到腺三酸盐 (ATP),提供了一种新的生物传感方法.
科学领域:
- 生物化学 生物化学
- 分析化学 分析化学
- 分子生物学分子生物学
背景情况:
- 核酸体是具有特定结合能力的多功能分子.
- 开发敏感和选择性的生物传感器对于各种应用至关重要.
- 体诱导的体形状变化可以被利用来进行感知.
研究的目的:
- 创建一个溶液相光检测传感器使用ATP结合的aptamer.
- 为了利用2'-氨基组进行对联体敏感的化反应.
- 为了证明传感器在检测腺三酸盐 (ATP) 的功能.
主要方法:
- 将2'-胺基组纳入ATP结合的胺基.
- 2'-胺与光胺的反应产生光产品.
- 检测光通过能量转移到一个绑定的 (发射在615nm).
- 监测ATP存在或不存在的光变化.
主要成果:
- 经过修改的阿帕特默在与光胺反应时产生光信号.
- 存在的ATP显著减少了化反应.
- 传感器在简化条件和尿液背景下都表现出功能.
结论:
- 化化学为开发基于aptamer的传感器提供了一个总体策略.
- 开发的传感器通过连接体诱导的形状变化对ATP敏感.
- 这种方法为创建新型生物传感器提供了一个有希望的方法.
相关概念视频
Nucleophilic Acyl Substitution of Carboxylic Acid Derivatives
Nucleophilic acyl substitution is an important class of substitution reactions involving a nucleophile and an acyl compound, such as carboxylic acids and their derivatives. In these reactions, the leaving group attached to the acyl group is substituted by a nucleophile. The general mechanism proceeds via two steps.
Acid Halides to Carboxylic Acids: Hydrolysis
Hydrolysis of acid halides is a nucleophilic acyl substitution reaction in which acid halides react with water to give carboxylic acids. The reaction occurs readily and does not require acid or a base catalyst.
As shown below, the mechanism involves a nucleophilic attack by water at the carbonyl carbon to form a tetrahedral intermediate. This is followed by the reformation of the carbon–oxygen π bond along with the departure of a halide ion. A final proton transfer step yields carboxylic acid...
As shown below, the mechanism involves a nucleophilic attack by water at the carbonyl carbon to form a tetrahedral intermediate. This is followed by the reformation of the carbon–oxygen π bond along with the departure of a halide ion. A final proton transfer step yields carboxylic acid...
Acid Halides to Amides: Aminolysis
Aminolysis is a nucleophilic acyl substitution reaction, where ammonia or amines act as nucleophiles to give the substitution product. Acid halides react with ammonia, primary amines, and secondary amines to yield primary, secondary, and tertiary amides, respectively.
In the first step of the aminolysis mechanism, the amine attacks the carbonyl carbon of the acyl chloride to form a tetrahedral intermediate. In the second step, the carbonyl group is re-formed with the elimination of a chloride...
In the first step of the aminolysis mechanism, the amine attacks the carbonyl carbon of the acyl chloride to form a tetrahedral intermediate. In the second step, the carbonyl group is re-formed with the elimination of a chloride...
Amides to Carboxylic Acids: Hydrolysis
Amides can undergo either acid-catalyzed hydrolysis or base-promoted hydrolysis through a typical nucleophilic acyl substitution. Each hydrolysis requires severe conditions.
Acid-catalyzed hydrolysis:
Hydrolysis of amides under acidic conditions yields carboxylic acids. Since the reaction occurs slowly, hydrolysis requires the conditions of heat.
The mechanism begins with the protonation of the carbonyl oxygen by the acid catalyst. The protonation makes the amide carbonyl carbon more...
Acid-catalyzed hydrolysis:
Hydrolysis of amides under acidic conditions yields carboxylic acids. Since the reaction occurs slowly, hydrolysis requires the conditions of heat.
The mechanism begins with the protonation of the carbonyl oxygen by the acid catalyst. The protonation makes the amide carbonyl carbon more...
Nitriles to Carboxylic Acids: Hydrolysis
Nitriles undergo acid-catalyzed hydrolysis or base-catalyzed hydrolysis to form a carboxylic acid. These reactions proceed via an amide intermediate.
¹³C NMR: ¹H–¹³C Decoupling
The probability of having two carbon-13 atoms next to each other is negligible because of the low natural abundance of carbon-13. Consequently, peak splitting due to carbon-carbon spin-spin coupling is not observed in spectra. However, protons up to three sigma bonds away split the carbon signal according to the n+1 rule, resulting in complicated spectra.
A broadband decoupling technique is used to simplify these complex, sometimes overlapping, signals. Broadband decoupling relies on a...
A broadband decoupling technique is used to simplify these complex, sometimes overlapping, signals. Broadband decoupling relies on a...


