通过prolyl imide键Cis/Trans异构化在Itk SH2域中调节的配体特异性:一个定量NMR研究
Patrick J Breheny1, Alain Laederach, D Bruce Fulton
1Department of Biochemistry, Biophysics and Molecular Biology, Program of Bioinformatics and Computational Biology, Iowa State University, Ames, Iowa 50011, USA.
介素-2 氨酸激酶 (Itk) SH2 域使用 cis/trans 异体化来结合不同的配体. 这项研究量化了亲和关系,揭示了对SH3域和类联体的明显偏好.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 结构生物学 结构生物学
背景情况:
- 介素二氨酸激酶 (Itk) Src同质性2 (SH2) 域结合了含有氨酸的和Itk Src同质性3 (SH3) 域.
- 联体结合特异性是由Itk SH2域内的Asn286-Pro287胺基键的cis/trans异构化调节的.
研究的目的:
- 开发和应用一种新的方法来量化对Itk SH2域的不同对象的联体亲属性.
- 阐明Itk SH2域的cis和trans conformers对其已知的连接体的差异性结合亲和力.
主要方法:
- 使用化学转移扰动和交叉峰值体积分析.
- 测量了基和Itk SH3域与Itk SH2域的cis和trans conformers的结合亲和力.
主要成果:
- 与变压体相比,cis imide 结合器对 Itk SH3 域的亲和力是 3.5 倍的.
- 变态变体表现出比cis变体对脂联体的4倍的亲和力.
结论:
- 这项研究量化地证明了Itk SH2域对象的差异性联体结合特异性.
- 开发的方法提供了一种一般方法,用于分析具有分子开关的结构异质系统.
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