转基因RNAi揭示了CTCF在H19基因印记中的基本功能
Andrew M Fedoriw1, Paula Stein, Petr Svoboda
1Howard Hughes Medical Institute, University of Pennsylvania, Philadelphia, PA 19104, USA.
概括
CCCTC结合因子 (CTCF) 蛋白质在卵细胞生长过程中保护H19差异甲基化域 (DMD) 免受甲基化. 卵细胞中CTCF缺乏会影响其发育和H19 DMD甲基化.
科学领域:
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 发展生物学 发展生物学
- 基因组学就是基因组学.
背景情况:
- 印制基因调节,特别是H19和胰岛素样生长因子2 (IGF2),依赖于CCCCTC结合因子 (CTCF) 与差异甲基化域 (DMD) 相互作用.
- 在 oogenesis 期间维持 H19 DMD 的低甲基化状态的机制以及 CTCF 在这个过程中的作用仍然不清楚.
研究的目的:
- 调查CTCF在 oogenesis 期间维持 H19 不同甲基化域 (DMD) 的低甲基化状态中的作用.
- 确定CTCF缺乏对卵细胞甲基化和发育能力的影响.
主要方法:
- 利用转基因RNA干扰 (RNAi) 方法创建具有降低CTCF蛋白水平的卵细胞.
- 评估了H19 DMD的甲基化状态,并评估了CTCF缺陷卵细胞的发育能力.
主要成果:
- 减少CTCF蛋白的卵细胞显示H19 DMD的甲基化增加.
- 缺乏CTCF的卵细胞显示发育能力下降,表明植入前发育受损.
- 在卵细胞生长过程中,CTCF似乎对H19 DMD的de novo甲基化起着保护作用.
结论:
- 在卵细胞发育过程中,CTCF对于保护H19差异甲基化域 (DMD) 免受de novo甲基化至关重要.
- 对于正常的植入前发育,CTCF是必需的,这凸显了它在早期胚胎形成中的关键作用.
相关概念视频
Transcription Factors
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
Transcription Factors
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
Cis-regulatory Sequences
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
CRISPR and crRNAs
Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
General Transcription Factors
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
Chromatin Structure and RNA Splicing
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...


