酵母TATA盒子含有的基因的识别和不同的调节
Andrew D Basehoar1, Sara J Zanton, B Franklin Pugh
1Graduate Program in Statistics, The Pennsylvania State University, University Park, PA 16802, USA.
Cell
|March 10, 2004
概括
研究人员确定了酵母中的共识TATA盒子序列,TATA (A/T) A (A/T) A (A/T) A (A/G). 塔塔盒子基因与应激反应和受调的转录有关,与没有塔塔的促进者形成鲜明对比.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 生物化学 生化学
背景情况:
- 塔塔盒是一个关键的真核细胞转录调节元件.
- 它的精确序列和在本地语境中的功能意义在很大程度上仍未确定.
- 了解促进子元素是解读基因调节的关键.
研究的目的:
- 在Saccharomyces基因组中定义本地TATA盒的共识序列.
- 研究含有TATA盒的基因的功能影响和特征.
主要方法:
- 对Saccharomyces基因组的生物信息分析.
- 应用已建立的TATA框标准来确定共识序列.
- 对含有TATA盒和没有TATA的促进剂进行比较分析.
主要成果:
- 达成共识的TATA盒子序列被确定为TATA ((A/T) A ((A/T) A ((A/G)).
- 大约20%的酵母基因拥有TATA盒.
- 具有TATA盒子的基因与压力反应有显著的关联,并表现出更高的调节水平.
- 这些基因优先招募SAGA复合体,而不是TFIID,而不是TATA-less促进体.
结论:
- 酵母转录调节表现出双极机制,可能平衡压力诱导和构成性基因表达.
- 塔塔盒在调节应激反应和高度控制的基因方面发挥着独特的作用.
- 同激活剂复合物的差异性招募 (SAGA与TFIID) 突出了不同的监管策略.
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