从部分定向样本的固态NMR光谱学中对粉样蛋白纤维的绝对结构约束
1Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Building 5, Room 112, Bethesda, Maryland 20892-0520, USA.
Journal of the American Chemical Society
|April 9, 2004
概括
固态NMR提供了对粉样纤维的分子级结构洞察力. 这种方法通过分析13C NMR光谱中的魔法角度旋转侧带模式来确定纤维的方向.
科学领域:
- 生物物理学的生物物理.
- 结构生物学 结构生物学
- 神经科学是一个神经科学.
背景情况:
- 粉样纤维素与像阿尔茨海默氏症这样的神经退行性疾病有关.
- 确定粉样纤维的精确分子结构对于了解疾病机制至关重要.
- 固态核磁共振 (NMR) 是研究蛋白质结构的强大技术.
研究的目的:
- 为了证明绝对,可以从部分定向的粉样纤维的固态NMR中获得分子水平的结构信息.
- 为了确定纤维轴相对于碳13C化学转移异型 (CSA) 张量相对的方向.
- 为了验证粉样纤维的结构模型.
主要方法:
- 在13C NMR光谱中使用魔法角旋转 (MAS) 侧带模式.
- 分析在平面基板上沉积的纤维,以创建一个异型的方向分布.
- 在Abeta1-40纤维素中测量纤维轴相对于Val12的碳基CSA张力的方向.
主要成果:
- 从固态NMR测量中获得了绝对的结构信息.
- 确定了纤维轴相对于碳13C CSA张力的方向.
- 对Abeta1-40纤维的实验结果与平行β片结构模型的预测一致.
结论:
- 在部分定向的粉样纤维上进行固态核磁共振,可获得绝对结构数据.
- 该方法准确地确定了与分子张量相对的纤维的方向.
- 该技术可用于验证和完善粉样纤维的结构模型.
相关概念视频
Globular and Fibrous Proteins
Many proteins can be classified into two distinct subtypes - globular or fibrous. These two types differ in their shapes and solubilities.
Globular proteins are also known as spheroproteins and typically are approximately round in shape. They contain a mix of amino acid types and contain differing sequences in their primary structures. Globular proteins have many different functions, such as enzymes, cellular messengers, and molecular transporters. These roles often require the proteins to be...
Globular proteins are also known as spheroproteins and typically are approximately round in shape. They contain a mix of amino acid types and contain differing sequences in their primary structures. Globular proteins have many different functions, such as enzymes, cellular messengers, and molecular transporters. These roles often require the proteins to be...
¹H NMR: Complex Splitting
A proton M that is coupled to a proton X results in doublet signals for M. However, NMR-active nuclei can be simultaneously coupled to more than one nonequivalent nucleus. When M is coupled to a second proton A, such as in styrene oxide, each peak in the doublet is split into another doublet.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
¹H NMR of Conformationally Flexible Molecules: Temporal Resolution
At room temperature, the chair conformer of cyclohexane undergoes rapid ring flipping between two equivalent chair conformers at a rate of approximately 105 times per second. These two chair conformers are in equilibrium. The rapid ring flipping results in the interconversion of the axial proton to an equatorial proton and an equatorial to the axial proton. Such interconversions are too rapid and cannot be detected on the NMR timescale. Hence, the NMR spectrometer cannot distinguish between the...
¹H NMR of Conformationally Flexible Molecules: Variable-Temperature NMR
The axial and equatorial protons in cyclohexane can be distinguished by performing a variable-temperature NMR experiment. In this process, except for one proton, the remaining eleven protons are replaced by deuterium. The deuterium substitution avoids the possible peak splitting caused by the spin-spin coupling between the adjacent protons. The remaining proton flips between the axial and equatorial positions.
NMR Spectroscopy Of Amines
In proton NMR spectroscopy, primary amines and secondary amines showcase their N–H protons as a broad signal in the chemical shift range between δ 0.5 and 5 ppm. The exact position in this range depends on several factors, including sample concentration, hydrogen bonding, and the type of solvent used. Since amine protons undergo fast proton exchange in solution, the protons are labile and therefore do not participate in any splitting with adjacent protons. Thus, the observed peak is broad and...
Other Nuclides: 31P, 19F, 15N NMR
Many organic, inorganic, and biological molecules contain spin-half nuclei such as nitrogen-15, fluorine-19, and phosphorus-31. As a result, NMR studies of these nuclei have found extensive applications in chemical and biological research.
While fluorine-19 and phosphorous-31 have high natural abundances (100%) and positive gyromagnetic ratios, nitrogen-15 has a low natural abundance and a negative gyromagnetic ratio. However, nitrogen-15 is still preferred over nitrogen-14 (which has a high...
While fluorine-19 and phosphorous-31 have high natural abundances (100%) and positive gyromagnetic ratios, nitrogen-15 has a low natural abundance and a negative gyromagnetic ratio. However, nitrogen-15 is still preferred over nitrogen-14 (which has a high...


