不同寻常的双功能催化,通过碳烯合成酶对表皮化和脱的催化
Maya Topf1, Gregory M Sandala, David M Smith
1School of Chemistry, University of Sydney, Sydney, NSW 2006, Australia. maya@salilab.org
Journal of the American Chemical Society
|August 12, 2004
概括
碳胺合成酶通过C5表皮化和C2/C3脱化将碳胺转化为碳胺抗生素. 计算揭示了一种有利的机制,涉及抽象和外部减少剂,以实现高效的合成.
科学领域:
- 生物化学 生物化学
- 计算化学的计算化学
- 有机合成 有机合成
背景情况:
- 贝塔乳酸抗生素,如卡巴,对于治疗细菌感染至关重要.
- 碳烯合成酶是这些重要药物的生物合成中的关键酶.
- 了解酶机制对于优化抗生素生产至关重要.
研究的目的:
- 为了阐明由碳胺合成酶催化碳胺生物合成的详细机制.
- 研究涉及转化过程中的立体化学转化,包括表皮化和脱化.
- 为了确定酶反应的能量有利的途径.
主要方法:
- 使用了高层次的初始量子化学计算.
- 该研究的重点是将 (3S,5S) - 碳胺转化为 (5R) - 碳胺.
- 通过计算分析了反应路径和能量概况.
主要成果:
- 拟议的机制涉及C5原子的初始抽象,然后进行表皮化.
- 确定了一种在热力学上有利的步骤中合表皮化和脱的新机制.
- 该机制使用外部减速剂,与替代途径相比,降低了能源需求.
结论:
- 计算结果提供了对碳烯生物合成的详细机制理解.
- 已识别的途径为酶转化提供了一种更具能量可行的途径.
- 这项研究有助于了解β-乳糖抗生素合成和酶催化.
相关概念视频
Sharpless Epoxidation
The conversion of allylic alcohols into epoxides using the chiral catalyst was discovered by K. Barry Sharpless and is known as Sharpless epoxidation. The use of a chiral catalyst enables the formation of one enantiomer of the product in excess. This chiral catalyst is mainly a chiral complex of titanium tetraisopropoxide and tartrate ester (specific stereoisomer). The stereoisomer used in the chiral catalyst dictates the formation of the enantiomer of the product. In other words, the use of...
Preparation of Epoxides
Overview
Epoxides result from alkene oxidation, which can be achieved by a) air, b) peroxy acids, c) hypochlorous acids, and d) halohydrin cyclization.
Epoxidation with Peroxy Acids
Epoxidation of alkenes via oxidation with peroxy acids involves the conversion of a carbon–carbon double bond to an epoxide using the oxidizing agent meta-chloroperoxybenzoic acid, commonly known as MCPBA. Since the O–O bond of peroxy acids is very weak, the addition of electrophilic oxygen of peroxy acids to...
Epoxides result from alkene oxidation, which can be achieved by a) air, b) peroxy acids, c) hypochlorous acids, and d) halohydrin cyclization.
Epoxidation with Peroxy Acids
Epoxidation of alkenes via oxidation with peroxy acids involves the conversion of a carbon–carbon double bond to an epoxide using the oxidizing agent meta-chloroperoxybenzoic acid, commonly known as MCPBA. Since the O–O bond of peroxy acids is very weak, the addition of electrophilic oxygen of peroxy acids to...
Acid-Catalyzed Ring-Opening of Epoxides
Epoxides that are three-membered ring systems are more reactive than other cyclic and acyclic ethers. The high reactivity of epoxides originates from the strain present in the ring. This ring strain acts as a driving force for epoxides to undergo ring-opening reactions either with halogen acids or weak nucleophiles in the presence of mild acid. The acid catalyst converts the epoxide oxygen, a poor leaving group, into an oxonium ion, a better leaving group, making the reaction feasible. The...
Base-Catalyzed Ring-Opening of Epoxides
Due to their highly strained structures, epoxides can readily undergo ring-opening reactions through nucleophilic substitution, either in the presence of an acid or a base. The nucleophilic substitution reactions in the presence of acid are called acid-catalyzed ring-opening reactions, and nucleophilic substitution reactions in the presence of a base are called base-catalyzed ring-opening reactions. Epoxides undergo base-catalyzed ring-opening reactions in the presence of a strong nucleophile...
Regioselectivity and Stereochemistry of Acid-Catalyzed Hydration
The rate of acid-catalyzed hydration of alkenes depends on the alkene's structure, as the presence of alkyl substituents at the double bond can significantly influence the rate.
Reduction of Alkenes: Asymmetric Catalytic Hydrogenation
Catalytic hydrogenation of alkenes is a transition-metal catalyzed reduction of the double bond using molecular hydrogen to give alkanes. The mode of hydrogen addition follows syn stereochemistry.
The metal catalyst used can be either heterogeneous or homogeneous. When hydrogenation of an alkene generates a chiral center, a pair of enantiomeric products is expected to form. However, an enantiomeric excess of one of the products can be facilitated using an enantioselective reaction or an...
The metal catalyst used can be either heterogeneous or homogeneous. When hydrogenation of an alkene generates a chiral center, a pair of enantiomeric products is expected to form. However, an enantiomeric excess of one of the products can be facilitated using an enantioselective reaction or an...


