在酵母基因组中,基因复制率非常低
1Human Genetics Center, School of Public Health, University of Texas Health Science Center, 1200 Hermann Pressler, Houston, TX 77030, USA.
概括
酵母基因组是酵母的基因组.
科学领域:
- 基因组学就是基因组学.
- 进化生物学 进化生物学
- 分子进化分子进化
背景情况:
- 基因重复是进化创新的主要驱动力.
- 以前对基因重复率的估计依赖于分子时钟模型,对重复的基因可能不准确.
- 了解基因复制率对于进化研究至关重要.
研究的目的:
- 为了估计酵母基因组中的基因复制率,而不用假设分子钟模型.
- 研究协同进化对基因重复率估计的影响.
- 量化基因转换在维持重复基因中的作用.
主要方法:
- 利用一种新的方法来估计基因复制率,绕过分子钟假设.
- 分析了酵母基因组数据,以识别和描述重复的基因.
- 模拟了基因转换对重复基因进化的影响.
主要成果:
- 预计酵母中的基因复制率为每10亿年每基因0.010.06,远低于之前的估计.
- 通过重复基因之间的基因转换进行广泛的协同进化被确定为这种差异的原因.
- 协同进化的平均持续时间估计为2500万年,基因转化率大约是突变率的28倍.
结论:
- 由于广泛的基因转换,分子钟模型不适合分析重复的基因.
- 基因转换在酵母中复制基因的进化和维护中起着至关重要的作用.
- 准确的基因复制率估计需要考虑诸如协同进化等机制.
相关概念视频
Replication in Prokaryotes
Overview
Replication in Prokaryotes
Overview
Gene Conversion
Other than maintaining genome stability via DNA repair, homologous recombination plays an important role in diversifying the genome. In fact, the recombination of sequences forms the molecular basis of genomic evolution. Random and non-random permutations of genomic sequences create a library of new amalgamated sequences. These newly formed genomes can determine the fitness and survival of cells. In bacteria, homologous and non-homologous types of recombination lead to the evolution of new...
Genome Copying Errors
DNA replication is a well-evolved process that copies millions of base pairs with high fidelity during each cell division. Occasionally a wrong base or a long stretch of wrong bases may get added to the daughter strands. If the errors are left unchecked, cells might accumulate several mutations that might endanger their survival. Therefore, the copying errors are checked and repaired at three levels.
Gene Duplication and Divergence
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are characterized.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are characterized.
Replication in Prokaryotes
DNA replication has three main steps: initiation, elongation, and termination. Replication in prokaryotes begins when initiator proteins bind to the single origin of replication (ori) on the cell's circular chromosome. Replication then proceeds around the entire circle of the chromosome in each direction from the two replication forks, resulting in two DNA molecules.
Many Proteins Work Together to Replicate the Chromosome
Replication is coordinated and carried out by a host of specialized...
Many Proteins Work Together to Replicate the Chromosome
Replication is coordinated and carried out by a host of specialized...


