子结核复合体的结构,其中一个被困的DEAD-box ATPase与RNA结合
Christian B F Andersen1, Lionel Ballut, Jesper S Johansen
1Department of Molecular Biology, University of Aarhus, DK-8000 Aarhus, Denmark.
概括
子结合核心复杂的复杂.
科学领域:
- 分子生物学分子生物学
- 结构生物学 结构生物学
- 生物化学 生物化学
背景情况:
- 子结合复合体 (EJC) 对于真核生物的转录后基因调节至关重要.
- 它沉积在拼接的信使RNAs (mRNAs) 上,并影响mRNA功能.
- 欧洲司法委员会的稳定核心是各种监管因素的平台.
研究的目的:
- 为了确定四重体外子结合核心复合体的晶体结构.
- 阐明真核细胞启动因子4AIII (eIF4AIII) 与RNA及其ATPase活性相互作用的结构基础.
主要方法:
- 使用X射线晶体学来获得高分辨率的结构.
- 该结构包括eIF4AIII与ATP模拟物MAGOH,Y14结合,MLN51的片段,以及一个聚瑞mRNA模拟物.
主要成果:
- 晶体结构显示eIF4AIII与六个核酸的酸脊柱相互作用.
- 结合eIF4AIII可以防止结合RNA的部分双链.
- MAGOH和Y14子单元在解前状态下稳定eIF4AIII,这表明ATPase激活需要最小的构造变化.
结论:
- 该结构提供了关于EJC组装和功能机制的见解.
- 了解EJC的结构动态是解读其在mRNA处理和调节中的作用的关键.
- 这些发现揭示了eIF4AIII在EJC中的ATPase活性调节.
相关概念视频
ATP Synthase: Structure
ATP synthase or ATPase is among the most conserved proteins found in bacteria, mammals, and plants. This enzyme can catalyze a forward reaction in response to the electrochemical gradient, producing ATP from ADP and inorganic phosphate. ATP synthase can also work in a reverse direction by hydrolyzing ATP and generating an electrochemical gradient. Different forms of ATP synthases have evolved special features to meet the specific demands of the cell. Based on their specific feature, ATP...
RNA Splicing
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
RNA Splicing
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
ATP Synthase: Mechanism
In animals, the mitochondrial F1F0 ATP synthase is the key protein that synthesizes ATP molecules through a complex catalytic mechanism. While the nuclear genome encodes the majority of ATP synthase subunits, the mitochondrial genome encodes some of the enzyme's most critical components. The formation of this multi-subunit enzyme is a complex multi-step process regulated at the level of transcription, translation, and assembly. Defects in one or more of these steps can result in decreased ATP...
Nuclear Export of mRNA
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
Nuclear Export of mRNA
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...


