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相关概念视频

DNA as a Genetic Template02:05

DNA as a Genetic Template

Two structural features of the DNA molecule provide a basis for the mechanisms of heredity: the four nucleotide bases and its double-stranded nature. The Watson-Crick model of double-helical DNA structure, proposed in 1952, drew heavily upon the X-ray crystallography work of researchers Rosalind Franklin and Maurice Wilkins. Watson, Crick, and Wilkins jointly received the Nobel Prize in Physiology or Medicine for their work in 1962. Franklin was, controversially, excluded from the prize for...
Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
The DNA Helix01:16

The DNA Helix

Overview
The DNA Helix01:07

The DNA Helix

Deoxyribonucleic acid, or DNA, is the genetic material responsible for passing traits from generation to generation in all organisms and most viruses. DNA is composed of two strands of nucleotides that wind around each other to form a spring-like structure called a double helix. However, the double helix is not perfectly symmetrical. Instead, there are regularly occurring grooves in the structure. The major groove occurs where the sugar-phosphate backbones are relatively far apart. This space...
DNA Helicases00:55

DNA Helicases

DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...

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相关实验视频

Updated: Jul 20, 2026

Single-Molecule Real-Time Visualization of DNA Unwinding by CMG Helicase
07:37

Single-Molecule Real-Time Visualization of DNA Unwinding by CMG Helicase

Published on: September 27, 2024

一个单分子DNA开关在自由溶液中的表征.

Samuel S White1, Haitao Li, Richard J Marsh

  • 1Department of Chemistry, University of Cambridge.

Journal of the American Chemical Society
|August 31, 2006
PubMed
概括

单分子FRET研究揭示了DNA开关中的Alexa-647染料光异构化. 这种光诱导的切换机制解释了观察到的FRET信号,并影响着染料-DNA相互作用.

科学领域:

  • 单分子生物物理学的单分子生物物理.
  • 摄影化学的使用.
  • 分子动力学分子动力学

背景情况:

  • 供体-接受体光标记DNA开关用于研究分子机制.
  • 在这些系统中,carbocyanine染料Alexa-647是常见的受体.
  • 了解光切换对于解释实验数据至关重要.

研究的目的:

  • 为了阐明Alexa-647在单个分子水平上的DNA开关上的光切换机制.
  • 为了研究染料的光异构化路径.
  • 为了将染料动态与FRET信号变化相关联.

主要方法:

  • 单分子光光谱学.
  • 时间分辨率单分子FRET测量.
  • 对FRET信号动态的分析,以探测光-DNA相互作用.

主要成果:

  • 在运输过程中,Alexa-647经历了光异构化,变成非光三重体的trans和cis状态.
  • 这些状态被快速填充,比探测器的传输时间更快.
  • 染料-DNA相互作用影响异构化速率,影响FRET信号的变化.
  • 观察到的现象解释了FRET实验中接近比率的零峰值.

更多相关视频

Structure-Based Simulation and Sampling of Transcription Factor Protein Movements along DNA from Atomic-Scale Stepping to Coarse-Grained Diffusion
09:17

Structure-Based Simulation and Sampling of Transcription Factor Protein Movements along DNA from Atomic-Scale Stepping to Coarse-Grained Diffusion

Published on: March 1, 2022

相关实验视频

Last Updated: Jul 20, 2026

Single-Molecule Real-Time Visualization of DNA Unwinding by CMG Helicase
07:37

Single-Molecule Real-Time Visualization of DNA Unwinding by CMG Helicase

Published on: September 27, 2024

Structure-Based Simulation and Sampling of Transcription Factor Protein Movements along DNA from Atomic-Scale Stepping to Coarse-Grained Diffusion
09:17

Structure-Based Simulation and Sampling of Transcription Factor Protein Movements along DNA from Atomic-Scale Stepping to Coarse-Grained Diffusion

Published on: March 1, 2022

结论:

  • 在单分子FRET实验中,光诱导效应具有重要意义.
  • 对于快速光诱导切换研究,建议防止染料-DNA和染料-表面相互作用.
  • 这项研究提供了对光剂-DNA分子内部动态的见解.