核酸和拷贝数变化的相对影响对基因表达表现型的相对影响
Barbara E Stranger1, Matthew S Forrest, Mark Dunning
1Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
概括
这项研究研究了基因变异,如单核酸多态 (SNP) 和复制数变异 (CNV),以及它们对基因表达的影响. 无论是SNP还是CNV,都有助于理解复杂的人类特征和疾病.
科学领域:
- 遗传学 是一个遗传学.
- 基因组学就是基因组学.
- 分子生物学分子生物学
背景情况:
- 单核酸多态 (SNP) 已被广泛研究,以确定疾病的相关性.
- 结构变异,包括副本数变异 (CNVs),越来越多地被认为是常见的遗传变异.
研究的目的:
- 评估CNV对复杂表型的贡献.
- 分析SNP和CNV与基因表达水平的关联.
主要方法:
- 对14925个成绩单进行了关联分析.
- 利用了国际HapMap项目的个人数据.
- 分析了单核酸多态 (SNP) 和副本数变异 (CNV).
主要成果:
- 在基因表达的基因变异中,SNP解释了83.6%.
- 在基因表达的遗传变异中,CNV占17.7%.
- 来自SNP和CNV的遗传信号显示了最小的重叠.
结论:
- 无论是SNP还是CNV,都对基因表达的遗传变异有显著的贡献.
- 研究SNP和CNV对于理解复杂的人类表型和疾病至关重要.
- 综合性基因组查询是阐明疾病原因的关键.
相关概念视频
Mutations
Overview
What is Gene Expression?
Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Gene Evolution - Fast or Slow?
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
Comparing Copy Number Variations and SNPs
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Mutations
Mutations are changes in the sequence of DNA. These changes can occur spontaneously or they can be induced by exposure to environmental factors. Mutations can be characterized in a number of different ways: whether and how they alter the amino acid sequence of the protein, whether they occur over a small or large area of DNA, and whether they occur in somatic cells or germline cells.
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
What is Gene Expression?
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is comprised of nucleotides and proteins are comprised of amino acids, a mediator is required to convert the information encoded in DNA into proteins. This mediator is the messenger RNA (mRNA). mRNA copies the blueprint from DNA by a process called transcription. In eukaryotes, transcription occurs in the nucleus by complementary base-pairing with the DNA template. The mRNA is then processed and...


