努普58/45的结构表明,通过分子间滑动,核孔直径灵活
Ivo Melcák1, André Hoelz, Günter Blobel
1Laboratory of Cell Biology, Howard Hughes Medical Institute, Rockefeller University, 1230 York Avenue, New York, NY 10021, USA.
概括
核毛孔复合体 核毛孔复合体
科学领域:
- 细胞生物学 细胞生物学
- 结构生物学是结构生物学.
- 生物化学 生物化学
背景情况:
- 核孔综合体 (NPC) 调节核与细胞质之间的运输.
- 核素 (Nups) 形成了NPC的中央通道,它具有灵活的直径.
- Nup58和Nup45是NPC中央运输道的关键组成部分.
研究的目的:
- 阐明NPC中央运输道灵活性的结构基础.
- 为了研究哺乳动物Nup58/45α-状区域的四级结构.
- 在NPC中提出直径调节机制.
主要方法:
- 进行X射线晶体学以确定哺乳动物Nup58/45α螺旋区域的结构.
- 在Nup58/45四度体内对蛋白质与蛋白质相互作用的分析.
- 不同的四聚体构造结构的结构比较.
主要成果:
- 鉴定出由Nup58/45.5的两个反平行针头二元体形成的独特四元体.
- 描述了疏水性内部二聚体接口和疏水性二聚体-二聚体关联.
- 观察到水友性残留物的横向位移,表明分子间滑动为11安格斯特罗姆.
结论:
- 鉴定到的四聚体结构和观察到的滑动机制为NPC灵活性提供了洞察力.
- Nup58/45子单元的周边滑动可能有助于NPC中央通道直径的动态调整.
- 这种结构机制可能对调节核细胞质运输至关重要.
相关概念视频
Protein Folding
Overview
Nuclear Stability
Protons and neutrons, collectively called nucleons, are packed together tightly in a nucleus. With a radius of about 10−15 meters, a nucleus is quite small compared to the radius of the entire atom, which is about 10−10 meters. Nuclei are extremely dense compared to bulk matter, averaging 1.8 × 1014 grams per cubic centimeter. If the earth’s density were equal to the average nuclear density, the earth’s radius would be only about 200 meters.
To hold positively charged protons together in the...
To hold positively charged protons together in the...
Newman Projections
Different notations are used to represent the three-dimensional structure of molecules on two-dimensional surfaces. One of the most commonly used representations is the dash-wedge formula. The dashed wedges, solid wedges, and the plane lines indicate the groups situated behind the plane, coming out of the plane, and in the plane, respectively.
The organic molecules rotate across the single bonds leading to numerous temporary three-dimensional structures of varying energy known as conformers.
The organic molecules rotate across the single bonds leading to numerous temporary three-dimensional structures of varying energy known as conformers.
¹H NMR: Complex Splitting
A proton M that is coupled to a proton X results in doublet signals for M. However, NMR-active nuclei can be simultaneously coupled to more than one nonequivalent nucleus. When M is coupled to a second proton A, such as in styrene oxide, each peak in the doublet is split into another doublet.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
Multi-pass Transmembrane Proteins and β-barrels
In multi-pass transmembrane proteins, the polypeptide chain crosses the membrane more than once. The transmembrane polypeptide chain either forms an α-helix or β-strand structure. α-Helix containing multi-pass transmembrane proteins are ubiquitous, whereas β-strand containing ones are mainly found in gram-negative bacteria, mitochondria, and chloroplasts.
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
Structure of Porins
Mitochondria, chloroplasts, and gram-negative bacteria have transmembrane, beta-barrel proteins called porins to mediate the free diffusion of ions and metabolites across the membrane. Mitochondrial porin precursors contain conserved amino acid sequences called beta signals at their C-terminal. Beta signals have a motif of PoXGXXHyXHy (Po-Polar, X-Any amino acid, G-Glycine, Hy-LargeHydrophobic), which are crucial for precursor recognition to initiate precursor assembly. Beta-barrel precursors...


