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相关概念视频

Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
Homologous Recombination02:31

Homologous Recombination

The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart, a...
Gene Conversion02:08

Gene Conversion

Other than maintaining genome stability via DNA repair, homologous recombination plays an important role in diversifying the genome. In fact, the recombination of sequences forms the molecular basis of genomic evolution. Random and non-random permutations of genomic sequences create a library of new amalgamated sequences. These newly formed genomes can determine the fitness and survival of cells. In bacteria, homologous and non-homologous types of recombination lead to the evolution of new...
Fixing Double-strand Breaks02:04

Fixing Double-strand Breaks

The double-stranded structure of DNA has two major advantages. First, it serves as a safe repository of genetic information where one strand serves as the back-up in case the other strand is damaged. Second, the double-helical structure can be wrapped around proteins called histones to form nucleosomes, which can then be tightly wound to form chromosomes. This way, DNA chains up to 2 inches long can be contained within microscopic structures in a cell. A double-stranded break not only damages...
Gene Conversion02:08

Gene Conversion

Other than maintaining genome stability via DNA repair, homologous recombination plays an important role in diversifying the genome. In fact, the recombination of sequences forms the molecular basis of genomic evolution. Random and non-random permutations of genomic sequences create a library of new amalgamated sequences. These newly formed genomes can determine the fitness and survival of cells. In bacteria, homologous and non-homologous types of recombination lead to the evolution of new...

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相关实验视频

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Iterative Optimization of DNA Duplexes for Crystallization of SeqA-DNA Complexes
11:42

Iterative Optimization of DNA Duplexes for Crystallization of SeqA-DNA Complexes

Published on: November 1, 2012

通过在小槽中可逆过渡金属复合体的形成有效调节DNA双重稳定性.

Marcin Kalek1, Andreas S Madsen, Jesper Wengel

  • 1Nucleic Acid Center, Department of Physics and Chemistry, University of Southern Denmark, Odense M, Denmark.

Journal of the American Chemical Society
|July 10, 2007
PubMed
概括

研究人员开发了一种使用过渡金属离子控制DNA双重稳定性的方法. 这种技术允许DNA杂交强度的可逆变化,为遗传研究和应用提供了新的可能性.

科学领域:

  • 化学生物学 化学生物学
  • 分子生物学分子生物学
  • 生物化学 生物化学

背景情况:

  • 双重DNA的热稳定性对于分子识别和生物过程至关重要.
  • 动态控制DNA杂交强度仍然是分子生物学中的一个重大挑战.

研究的目的:

  • 开发一种用于可逆调制DNA双重热稳定性的新方法.
  • 为了研究过渡金属复合对DNA杂交的影响.

主要方法:

  • 一个特皮里丁连接体与改性核酸 (2'-amino-2'-deoxyuridine和2'-amino-LNA) 的结合.
  • 这些金属复合性单体的融入到Oligodeoxyribonucleotides.
  • 在添加过渡金属离子 (例如,Ni2+) 和EDTA时分析DNA双重热稳定性 (Tm值).

主要成果:

  • 用特皮里丁功能化的DNA复杂体在热稳定性 (ΔTm从-15.5到+49.0°C) 中表现出显著的变化.
  • 当单体在相反的链中时,观察到与Ni2+的非凡双重稳定,这表明介导的链间联系.
  • 通过交替添加金属离子和EDTA来证明稳定性调制的可逆性.

结论:

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Published on: November 1, 2012

Design and Synthesis of a Reconfigurable DNA Accordion Rack
07:44

Design and Synthesis of a Reconfigurable DNA Accordion Rack

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Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules

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  • 过渡金属复合提供了可调和可逆控制DNA双重稳定性的有效策略.
  • 开发的方法为需要动态调制DNA杂交的应用提供了强大的工具.
  • 了解金属介导相互作用可以导致基于DNA的新型材料和治疗方法的设计.