对于用于DNA度测定的化聚电解质的设计
Chunyan Chi1, Alexander Mikhailovsky, Guillermo C Bazan
1Department of Chemistry, Institute for Polymers and Organic Solids, University of California, Santa Barbara, California 93106, USA.
Journal of the American Chemical Society
|August 21, 2007
概括
新的阴离子联多电解质使敏感的双链DNA度确定成为可能. 这些聚合物在结合时改变颜色和排放,允许在广泛的DNA度范围内进行准确的量化.
科学领域:
- 聚合物化学 聚合物化学
- 生物物理化学 生物物理化学
- 分析化学 分析化学
背景情况:
- 在分子生物学和诊断中,开发用于确定双链DNA (dsDNA) 度的敏感和选择性方法至关重要.
- 现有的方法可能在灵敏度,动态范围上有局限性,或需要复杂的程序.
- 结合聚电解质提供独特的光学特性,可用于传感应用.
研究的目的:
- 设计,合成和表征用于dSDNA度确定的新型阴离子联聚电解质.
- 调查dSDNA结合时的光谱变化背后的光物理机制.
- 为了优化聚合物系统在dSDNA量化中具有广泛的动态范围.
主要方法:
- 合成和表征带离子结合的多电解质 (poly110和poly120) 与不同的2,1,3-二 (BT) 含量.
- 光谱分析 (光照发光) 用于研究多电解质和dSDNA之间的相互作用.
- 基于光谱变化 (辐射颜色变化,参数三角形) 的校准曲线的开发,以量化dsDNA度.
- 探索扩大可测量的dsDNA度范围的策略.
主要成果:
- 聚110和聚120在与dsDNA结合时呈现出明显的蓝色至绿色的发射颜色变化.
- 这些光谱变化归因于从烯-段到BT单元的Förster共振能量转移 (FRET) 的增强,BT量子产量的增加以及烯-排放的灭.
- 从光谱响应得出的校准曲线允许dSDNA的确定.
- 结合不同初始聚电解质度的数据,可以将可测量的dsDNA范围扩展到七个数量级.
结论:
- 阴离子联聚电解质poly110和poly120是有效的光探针,用于测量dSDNA度.
- 观察到的光谱变化为dsDNA存在提供了敏感和可量化的反应.
- 开发的系统显示出非常广泛的动态范围,使其适用于需要dDNA定量化的各种生物应用.
相关概念视频
DNA Agarose Gel Electrophoresis
Agarose gel electrophoresis is a laboratory technique commonly used to separate DNA fragments by size. However, it can also be used to isolate and purify DNA fragments using a gel extraction protocol.
Gel extraction follows five major steps: running gel electrophoresis to separate fragments, isolating the individual bands, extracting DNA from those bands, and removing the dye and salts from the extracted mixture to obtain pure DNA.
In cloning experiments, both the insert and vector DNA...
Gel extraction follows five major steps: running gel electrophoresis to separate fragments, isolating the individual bands, extracting DNA from those bands, and removing the dye and salts from the extracted mixture to obtain pure DNA.
In cloning experiments, both the insert and vector DNA...
EDTA: Chemistry and Properties
Polydentate ligands are most widely used in complexometric titrations because they form more stable complexes with the metal ions than mono- or bidentate ligands due to the chelate effect. Examples of polydentate ligands are ethylenediaminetetraacetic acid (EDTA), crown ethers, and cryptands. The most important feature of optimal polydentate ligands is the ability to form 1:1 complexes in a single-step process. Amino carboxylic acid derivatives are frequently used as complexing agents. EDTA is...
Ion-Exchange Chromatography
Ion-exchange chromatography, or IEC, is a technique for separating ions based on their affinity for the stationary phase. The stationary phase is a cross-linked polymer resin with covalently attached ionic functional groups. The functional groups can be either positively charged (cation exchangers) or negatively charged (anion exchangers). A cation exchanger consists of a polymeric anion and active cations, while an anion exchanger is a polymeric cation with active anions. The choice of...
Capillary Electrophoresis: Applications
Capillary electrophoretic separations offer various modes, each with unique applications. These modes include capillary zone electrophoresis, capillary gel electrophoresis, capillary array electrophoresis, capillary isoelectric focusing, capillary isotachophoresis, micellar electrokinetic chromatography, and capillary electrochromatography.
Capillary zone electrophoresis (CZE) separates ionic components based on their electrophoretic mobility. It has been used to separate proteins, amino acids,...
Capillary zone electrophoresis (CZE) separates ionic components based on their electrophoretic mobility. It has been used to separate proteins, amino acids,...
Complexometric Titration: Ligands
Different monodentate and polydentate ligands are used as complexing agents in complexometric titration reactions. The formation of complexes by mono- and bidentate ligands involves two or more intermediate steps, limiting their use as complexing agents. In comparison, polydentate ligands can form complexes with metal ions in a single-step process, facilitating sharper end points. This means polydentate ligands, such as amino carboxylic acid derivatives, are most commonly employed in...


