在Cys2His2指的金属合折叠
Wenfei Li1, Jian Zhang, Jun Wang
1National Laboratory of Solid State Microstructure and Department of Physics, Nanjing University, Nanjing 210093, China.
Journal of the American Chemical Society
|January 1, 2008
概括
离子对于指蛋白折叠,稳定结构和指导过程至关重要. 这项研究通过计算揭示了结合如何影响折叠和二次结构形成.
科学领域:
- 生物化学 生物化学
- 计算生物学 计算生物学
- 结构生物学 结构生物学
背景情况:
- 指是重要的真核蛋白质,需要离子结合才能正常折叠和功能.
- 了解结合折叠对于研究涉及金属离子的生物过程至关重要.
研究的目的:
- 通过计算来研究Cys2His2型指图案的折叠机制.
- 为了阐明折和离子结合之间的合.
- 在模拟中考虑电荷转移和金属诱导的质子化/解质子化效应.
主要方法:
- 经典分子动力学模拟,隐含电荷转移和金属诱导的质子化/解质子化.
- 用明确溶剂进行密集的模拟,用于含有和不含的.
- 对结合,折叠路径和结构变化的分析.
主要成果:
- 离子稳定了原生结构,并积极参与折叠过程.
- 早期结合,指导β毛和α螺旋形成,由疏水性残留包装介导.
- 观察到疏水性包装,带协调和诱导的结构变化之间的合.
结论:
- 结合是指折叠的组成部分,影响二次结构的形成和稳定.
- 该研究提供了对金属辅因子依赖的蛋白质折叠机制的见解.
- 这些发现与实验观测一致,为人们更深入地了解金属诱导的形状变化提供了帮助.
更多相关视频
11:04Ion Mobility-Mass Spectrometry Techniques for Determining the Structure and Mechanisms of Metal Ion Recognition and Redox Activity of Metal Binding Oligopeptides
Published on: September 7, 2019
07:49Creating and Applying a Reference to Facilitate the Discussion and Classification of Proteins in a Diverse Group
Published on: August 16, 2017
相关概念视频
Protein Folding
Overview
Protein Folding
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Folding
Overview
Crystal Field Theory - Octahedral Complexes
Crystal Field Theory
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
Protein Complexes with Interchangeable Parts
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Catenins
Catenins are characterized by multiple binding domains and dynamic structures that allow them to function as linker proteins in cell junction complexes. All catenins, except α-catenin, contain a characteristic protein sequence called the armadillo repeat and are therefore also called armadillo proteins.
Catenins in Cell Junctions
Catenins bind to cell adhesion molecules such as cadherins and link them to different cytoskeletal proteins depending on the type of cell junction. At the adherens...
Catenins in Cell Junctions
Catenins bind to cell adhesion molecules such as cadherins and link them to different cytoskeletal proteins depending on the type of cell junction. At the adherens...
