通过促进 RNA 聚合酶 II 的近端暂停来调节转录
1Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.
概括
RNA聚合酶II暂停是跨物种基因表达的关键调节步骤. 这种限制速率的暂停发生在初始RNA合成后,突出显示了其在控制基因活性方面的重要性.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 基因规则 基因规则
背景情况:
- RNA聚合酶II (Pol II) 是负责转录蛋白质编码基因的酶.
- 在促进物近位点停留的Pol II是一种在Drosophila和哺乳动物中观察到的保存机制.
- 这种暂停事件发生在Pol II招募和基因促进器启动后.
研究的目的:
- 调查RNA聚合酶II在基因调节中的促进子-近位暂停的意义.
- 了解这种速度限制步骤在早期延长中的作用.
- 突出这一阶段作为基因表达控制的潜在目标.
主要方法:
- 来自Drosophila和哺乳动物模型的基因表达数据的分析.
- 生物化学测定用于研究RNA聚合酶II活性.
- 转录启动和延长的计算建模.
主要成果:
- 证实RNA聚合酶II在许多基因中的促销器近位点停顿.
- 确定此暂停是Pol II启动后的速度限制步骤.
- 证明了这个早期的延长阶段是广泛用于基因调节的点.
结论:
- 促进 RNA 聚合酶 II 的近端暂停是一个关键的调节机制.
- 这种保存暂停事件为基因表达提供了一个关键的控制点.
- 准这一阶段为调节基因活性提供了广泛的潜力.
相关概念视频
Transcription Initiation
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
Transcription Elongation Factors
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
Transcription Elongation Factors
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
Eukaryotic RNA Polymerases
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...


