欧核细胞转录回路的演变
Brian B Tuch1, Hao Li, Alexander D Johnson
1Department of Biochemistry and Biophysics, University of California, San Francisco, CA, USA.
概括
基因调节的进化变化推动了生命的多样性. 即使是密切相关的物种在他们的转录电路中也表现出显著的差异,这是最近的全基因组研究揭示的.
科学领域:
- 进化生物学是进化的生物学.
- 分子生物学分子生物学
- 基因组学就是基因组学.
背景情况:
- 转录回路的进化修饰是生物多样性的关键驱动力.
- 动物研究表明,在选择性压力下,微小的基因调节变化如何影响形态和生理.
研究的目的:
- 调查不同生物体中转录性重新连接的程度.
- 了解基因调节在进化多样化中的作用.
主要方法:
- 全基因组研究研究.
- 对密切相关物种的转录调节进行比较分析,重点是单细胞酵母.
主要成果:
- 在全基因组研究中发现了广泛的转录重新连接的证据.
- 密切相关的生物利用明显不同的基因调节电路.
结论:
- 转录的重新连接在生命多样性的进化中起着重要作用.
- 基因调节是一个动态的过程,即使在相关物种之间也可能发生广泛的变化.
相关概念视频
Bacterial Transcription
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Eukaryotic Transcription Activators
Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These domains are...
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These domains are...
The Eukaryotic Promoter Region
The eukaryotic promoter region is a segment of DNA located upstream of a gene. It contains an RNA polymerase binding site, a transcription start site, and several cis-regulatory sequences. The proximal promoter region is located in the vicinity of the gene and has cis-regulatory sequences and the core promoter. The core promoter is the binding site for RNA polymerase and is usually located between -35 and +35 nucleotides from the transcription start site. The distal promoter regions are...
The Eukaryotic Promoter Region
The eukaryotic promoter region is a segment of DNA located upstream of a gene. It contains an RNA polymerase binding site, a transcription start site, and several cis-regulatory sequences. The proximal promoter region is located in the vicinity of the gene and has cis-regulatory sequences and the core promoter. The core promoter is the binding site for RNA polymerase and is usually located between -35 and +35 nucleotides from the transcription start site. The distal promoter regions are...
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
Eukaryotic Transcription Inhibitors
Certain biochemical processes, such as embryonic development and cell growth regulation, depend on the repression of specific genes. DNA binding proteins known as eukaryotic transcription inhibitors regulate the repression of gene expression in eukaryotes. The presence of these inhibitors at the required location and time in the cell is triggered by the presence of hormones and additional signals from other cells.
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...


