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化学上无处不在的基因组H2B刺激hDot1L介导的细胞内基因组甲基化
Robert K McGinty1, Jaehoon Kim, Champak Chatterjee
1Laboratory of Synthetic Protein Chemistry, The Rockefeller University, New York, New York 10065, USA.
Nature
|May 2, 2008
概括
基因素H2B (uH2B) 的泛基化直接通过hDot1L刺激H3 K79的甲基化,揭示了直接的交叉通道机制. 这一发现澄清了H2B在基因组修饰途径和基因组调节中的功能.
科学领域:
- 表观遗传学和分子生物学
- 染色体生物学 染色体生物学
- 翻译后修改 翻译后修改
背景情况:
- "基因组编码"假设,基因组修改调节了基因组表达.
- 基因组普遍存在 (uH2B) 与基因组H3 K79甲基化有关,但其具体作用尚不清楚.
研究的目的:
- 为了阐明H3 K79甲基化与H3 K79甲基化交叉的H2B的直接功能.
- 为了证明H2B和H3K79甲基化之间的相互作用背后的生化机制.
主要方法:
- 使用表达蛋白质结合 (EPL) 的基因组H2B的特定部位化学无处不在.
- 将无处不在的H2B重构成定义的核体.
- 生物化学试验测量H3 K79甲基化通过人类Dot1-like (hDot1L).
主要成果:
- 化学上无处不在的H2B直接刺激hDot1L介导的H3 K79的甲基化.
- 刺激是由hDot1L的催化域介导的,可能是通过全效应.
- uH2B增强甲基化,特别是在含有修饰的核细胞体内.
结论:
- 这项研究表明,在核细胞体内,H2B和H3K79甲基化之间存在直接的生化交叉.
- uH2B作为通过hDot1L.H3 K79甲基化的直接激活剂.
- 这些发现为基因组修饰交叉通话及其在基因组调节中的作用提供了机制性的洞察力.
相关概念视频
Covalently Linked Protein Regulators
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
These groups modify specific amino acids in a protein.
The Nucleosome Core Particle
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Spreading of Chromatin Modifications
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer is an enzyme that can...
Writers
The writer is an enzyme that can...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
The Nucleosome Core Particle
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...

