探测核细胞体功能:一种高度多用途的合成 histone H3 和 H4 突变的库
Junbiao Dai1, Edel M Hyland, Daniel S Yuan
1High Throughput Biology Center, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Cell
|September 23, 2008
概括
研究人员创建了486种组素突变体来绘制核体功能图,揭示了对DNA代谢,转录和修复的新见解. 这项研究增强了我们对染色质调节及其对细胞过程的影响的理解.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物化学 生物化学
背景情况:
- 核体结构对于调节DNA代谢和转录至关重要.
- 了解每个基因组残留的精确作用对于破译核细胞功能至关重要.
研究的目的:
- 系统地探测每个组素H3和H4残留物对核细胞功能的贡献.
- 将化学敏感性和转录沉默要求的模式映射到核细胞表面.
- 为了确定核细胞组件内的质子残留和相互依赖的新功能.
主要方法:
- 在Saccharomyces cerevisiae中生成了一个486个系统的素H3和H4替代和删除突变的库.
- 利用每个突变者的独特分子条形码,通过放大,标记和微阵列杂交来促进池识别.
- 评估复杂的表型,包括竞争力,DNA修复能力和合成遗传相互作用.
主要成果:
- 将化学敏感性和转录性沉默要求的全球模式映射到核细胞表面.
- 确定了对染色体完整性和转录性调节至关重要的特定基因组残留物.
- 揭示了不同基因组残留物和核细胞组分及其修饰剂之间的相互依赖的新功能.
结论:
- 这项研究提供了一个全面的功能地图的素H3和H4残留物.
- 这项工作加深了我们对核酶体动力学及其在DNA代谢和基因表达中的作用的理解.
- 系统方法为未来对染色体调节的研究提供了一个强大的平台.
相关概念视频
The Nucleosome Core Particle
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
The Nucleosome Core Particle
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
Histone Modification
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone deacetylase,...
Nucleosome Remodeling
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
The Nucleosome
Human DNA is almost two meters long. However, it is compressed inside a tiny nucleus measuring only a few microns in diameter. To make this degree of compaction possible, DNA is organized into several sequential levels so that it can fit into such a tiny space. The most compact form of DNA is a chromosome that can be seen under a microscope in a dividing cell.
In a chromosome, DNA is wound twice around a protein complex called a histone octamer core, which consists of 8 histone proteins. This...
In a chromosome, DNA is wound twice around a protein complex called a histone octamer core, which consists of 8 histone proteins. This...
The Nucleosome
DNA in a human cell is almost 2m long and it is packed inside a tiny nucleus that is only a few microns in diameter. The level of compaction of DNA inside the nucleus is astonishing. It is organized into several sequentially higher levels of compaction to fit into such a tiny space. The most compact form of DNA is a chromosome that can be seen under a microscope in a dividing cell.
DNA is wound twice around a protein complex called histone core, that consist of 8 histone proteins. This complex...
DNA is wound twice around a protein complex called histone core, that consist of 8 histone proteins. This complex...


