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Chromatin Isolation by RNA Purification ChIRP
Published on: March 25, 2012
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通过非编码RNAs的转录启动级联逐步重塑色素
Kouji Hirota1, Tomoichiro Miyoshi, Kazuto Kugou
1Cellular & Molecular Biology Laboratory, RIKEN Advanced Science Institute, Wako-shi, Saitama 351-0198, Japan. khirota@rg.med.kyoto-u.ac.jp
Nature
|September 30, 2008
概括
通过RNA聚合酶II对非编码RNA (ncRNA) 的转录对于酵母中的染色质重塑和基因激活至关重要. 这一过程使得转录激活器可以访问DNA序列.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物化学 生物化学
背景情况:
- 最近的研究揭示了许多非编码RNA (ncRNA) 转录.
- 许多以前被忽视的基因组区域在转录上是活跃的.
- 大多数ncRNA的功能在很大程度上仍未知.
研究的目的:
- 研究ncRNA转录在染色体重塑中的作用.
- 为了阐明裂变酵母中的fbp1(+) 位点转录激活的机制.
主要方法:
- 利用高密度的瓦片阵列和FANTOM3数据进行转录组分析.
- 在裂变酵母 (Schizosaccharomyces pombe) 中进行了专注于fbp1(+) 位点的实验.
- 采用转录终止器插入来破坏ncRNA合成.
主要成果:
- 证明RNA聚合酶II (RNAPII) 对ncRNAs的转录对于fbp1(+) 位点的染色质重塑至关重要.
- 在ncRNA转录过程中观察到染色质逐渐转化为开放配置.
- 表明RNAPII转位在转录起点的上游与ncRNA生产有关.
- 发现通过终端插入来破坏ncRNA转录可以防止染色体的改变.
结论:
- ncRNA转录是染色质可访问性的先决条件.
- 转录通过促进区促进转录激活剂和RNAPII的获取.
- 这种机制在基因激活过程中起着至关重要的作用.
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