从细菌SecYE结构推断出Sec机械的形态转变
Tomoya Tsukazaki1, Hiroyuki Mori, Shuya Fukai
1Department of Biological Information, Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku, Yokohama-shi, Kanagawa 226-8501, Japan.
Nature
|October 17, 2008
概括
在Sec的转换位置上.
科学领域:
- 结构生物学是结构生物学.
- 分子生物学分子生物学
- 蛋白质转位的转位是蛋白质转位.
背景情况:
- 超过30%的蛋白质是膜集成或分泌的.
- 这种Sec转位子 (SecYEG/Sec61) 促进了跨膜的蛋白质定位.
- SecA ATPase驱动细菌的翻译后转位.
研究的目的:
- 从含有SeCA的生物体中确定SeCYE转位元的高分辨率结构.
- 阐明SecA-SecYE相互作用的机制及其在蛋白质转位中的作用.
主要方法:
- 在X射线晶体学 (3.2-A分辨率) 中.
- 复杂的形成与反-SecY Fab片段的复杂形成.
- 分子动力学模拟的模拟.
- 不硫化物测绘地图
主要成果:
- 观察到SecYE转位的"开放前"状态.
- SecA和Fab碎片结合到SecY上的一个共同位置.
- 在SecYE中,SecA结合似乎诱导了形状转变.
- 确定了一种新的Seca-SecYE接口,表明了合作性构造变化.
结论:
- SecYE 转位元存在于一个动态的"开放前"状态.
- 结合SecA与SecY对于启动转位子中的形状变化至关重要.
- SecA和SecYE之间的合作形状变化对于功能复合体形成和蛋白质转移至关重要.
相关概念视频
Post-translational Translocation of Proteins to the RER
A sizable fraction of proteins destined for ER are first synthesized in the cell cytosol and then transported across the ER membrane–a process called post-translational translocation. Similar to cotranslationally translocated proteins, these proteins also use the Sec translocon complex to enter the ER lumen.
Targeting proteins to the ER
Hsp40 and Hsp70 chaperone molecules bind the translated proteins in the cytosol to prevent their folding. The chaperone binding helps to keep the signal...
Targeting proteins to the ER
Hsp40 and Hsp70 chaperone molecules bind the translated proteins in the cytosol to prevent their folding. The chaperone binding helps to keep the signal...
Protein Translocation Machinery on the ER Membrane
The translocon complex situated on the ER membrane is the main gateway for the protein secretory pathway. It facilitates the transport of nascent peptides into the ER lumen and their insertion into the ER membrane.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the translocon complex.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the translocon complex.
Insertion of Single-pass Transmembrane Proteins in the RER
Integral membrane proteins are proteins adhered to the lipid bilayer of a cell organelle or membrane. They can be of two types: transmembrane integral proteins that span the lipid bilayer and monotopic proteins that are attached to either side of the membrane but do not pass through it.
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
Bacterial Translocation and Protein Secretion
Bacterial protein secretion involves translocation systems to ensure proteins reach their designated locations, including the plasma membrane, periplasm, outer membrane, or the external environment. These translocation systems are vital for bacterial physiology, supporting processes like membrane assembly, enzymatic activity in the periplasm, and interactions with the external environment. The division of labor between Sec and Tat pathways ensures efficiency in handling proteins with diverse...
Cotranslational Protein Translocation
Translocation of proteins across membranes is an ancient process that occurs even in bacteria and archaebacteria. In fact, the components of the translocation machinery are still conserved between prokaryotes and eukaryotes.
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
Protein Folding
Overview


