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相关概念视频

Allosteric Proteins-ATCase01:19

Allosteric Proteins-ATCase

Binding sites linkages can regulate a protein's function.  For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to  N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis pathway,...
Allosteric Regulation01:08

Allosteric Regulation

Allosteric regulation of enzymes occurs when the binding of an effector molecule to a site that is different from the active site causes a change in the enzymatic activity. This alternate site is called an allosteric site, and an enzyme can contain more than one of these sites. Allosteric regulation can either be positive or negative, resulting in an increase or decrease in enzyme activity. Most enzymes that display allosteric regulation are metabolic enzymes involved in the degradation or...
Allosteric Regulation01:08

Allosteric Regulation

Allosteric regulation of enzymes occurs when the binding of an effector molecule to a site that is different from the active site causes a change in the enzymatic activity. This alternate site is called an allosteric site, and an enzyme can contain more than one of these sites. Allosteric regulation can either be positive or negative, resulting in an increase or decrease in enzyme activity. Most enzymes that display allosteric regulation are metabolic enzymes involved in the degradation or...
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence the...
Cooperative Allosteric Transitions01:58

Cooperative Allosteric Transitions

Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
Cooperative Allosteric Transitions01:58

Cooperative Allosteric Transitions

Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...

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相关实验视频

Updated: Jun 28, 2026

Spatiotemporal Control of Protein Activity through Optogenetic Allosteric Regulation
08:00

Spatiotemporal Control of Protein Activity through Optogenetic Allosteric Regulation

Published on: October 4, 2024

在蛋白质中设计异质控制的表面地点.

Jeeyeon Lee1, Madhusudan Natarajan, Vishal C Nashine

  • 1Department of Chemistry, Pennsylvania State University, University Park, PA 16802, USA.

Science (New York, N.Y.)
|October 18, 2008
PubMed
概括

科学家们通过将光感应域与酶联系起来,设计出一种新的蛋白质 - - PAS-DHFR. 这创造了一个可控制的,对光有反应的蛋白质,展示了蛋白质工程的新方法.

科学领域:

  • 生物化学 生物化学
  • 蛋白质工程是指蛋白质工程.
  • 分子生物学分子生物学

背景情况:

  • 蛋白质家族表现出共同演变的氨基酸网络,将遥远的功能表面连接起来.
  • 这些网络建议一种策略,通过加入分子内部网络,对蛋白质进行基因控制.

研究的目的:

  • 通过创建一个嵌合式蛋白质来测试工程质控制的概念.
  • 为了证明蛋白质活性可以通过将信号域连接到酶来调节.

主要方法:

  • 蛋白质家族的统计分析,以确定共同演变的氨基酸网络.
  • 通过将植物Per/Arnt/Sim (PAS) 信号域与大肠杆菌二叶酸减少酶 (DHFR) 融合,设计和制造一种仿制蛋白 (PAS-DHFR).

主要成果:

  • 设计的PAS-DHFR仿制蛋白在没有优化的情况下表现出依赖光的催化活性.
  • 观察到的依赖光的活性取决于特定的连接部位和两个父蛋白的已知信号机制.

结论:

  • PAS-DHFR 作为一种概念证明,用于将调节功能工程化为蛋白质.
  • 在保存的全位的接口设计是创建蛋白质中新型调节活动的可行策略.

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Last Updated: Jun 28, 2026

Spatiotemporal Control of Protein Activity through Optogenetic Allosteric Regulation
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Spatiotemporal Control of Protein Activity through Optogenetic Allosteric Regulation

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Modeling an Enzyme Active Site using Molecular Visualization Freeware
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Modeling an Enzyme Active Site using Molecular Visualization Freeware

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Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins

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