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相关概念视频

Cooperative Allosteric Transitions01:58

Cooperative Allosteric Transitions

Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
Cooperative Allosteric Transitions01:58

Cooperative Allosteric Transitions

Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
Cooperative Allosteric Transitions01:58

Cooperative Allosteric Transitions

Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
Allosteric Proteins-ATCase01:19

Allosteric Proteins-ATCase

Binding sites linkages can regulate a protein's function.  For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to  N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis pathway,...
Phosphorylation01:02

Phosphorylation

The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
Phosphorylation01:02

Phosphorylation

The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...

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相关实验视频

Updated: Jun 22, 2026

Oligopeptide Competition Assay for Phosphorylation Site Determination
09:16

Oligopeptide Competition Assay for Phosphorylation Site Determination

Published on: May 18, 2017

在多站位酸化系统中无限制的多态性.

Matthew Thomson1, Jeremy Gunawardena

  • 1Biophysics Program, Harvard University, Cambridge, Massachusetts 02138, USA.

Nature
|June 19, 2009
PubMed
概括

多站点蛋白质酸化是一种关键的调节机制,可以产生复杂的信号网络. 这项研究揭示了对立的酶会产生不同的,稳定的蛋白质形分布,使灵活的细胞信息处理成为可能.

科学领域:

  • 生物化学和分子生物学
  • 系统生物学 系统生物学
  • 后翻译修改 后翻译修改

背景情况:

  • 可逆蛋白质酸化是一种关键的翻译后修饰,真核生物表现出每种蛋白质显著更多的酸化点,而不是 prokaryotes.
  • 多位化产生了指数级的蛋白质型,每一种都有可能具有不同的生物学作用.
  • 这些多样化的形在细胞内的调节和分布在很大程度上是未知的.

研究的目的:

  • 在相反的酶和酸酶活性下,研究多站点基质的基形式的稳定状态分布.
  • 探索复杂的蛋白质组的监管潜力和信息处理能力.
  • 开发一个简化的数学框架来分析多站点酸化动态.

主要方法:

  • 在多位基板上对抗酶和酸酶活动的数学建模.
  • 对稳定状态形度的几何性质的分析.
  • 代数方程的导出,以取代复杂的微分方程模拟.

主要成果:

  • 在多位基板上对抗酶作用可以导致在稳定状态下明显的稳定形分布.
  • 稳定分布的数量随着酸化位数 (n) 的增加而增加.
  • 形分布可以是聚焦的或分散的,这表明一种能够编码信息的流体调节网络.

更多相关视频

A Mass Spectrometry-Based Approach to Identify Phosphoprotein Phosphatases and their Interactors
10:17

A Mass Spectrometry-Based Approach to Identify Phosphoprotein Phosphatases and their Interactors

Published on: April 29, 2022

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
12:26

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay

Published on: May 3, 2018

相关实验视频

Last Updated: Jun 22, 2026

Oligopeptide Competition Assay for Phosphorylation Site Determination
09:16

Oligopeptide Competition Assay for Phosphorylation Site Determination

Published on: May 18, 2017

A Mass Spectrometry-Based Approach to Identify Phosphoprotein Phosphatases and their Interactors
10:17

A Mass Spectrometry-Based Approach to Identify Phosphoprotein Phosphatases and their Interactors

Published on: April 29, 2022

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
12:26

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay

Published on: May 3, 2018

结论:

  • 形分布的可塑性为真核细胞中复杂的信息处理提供了一个机制.
  • 大量的酸化场所可以通过增加监管潜力来赋予功能优势.
  • 一种新的数学方法简化了多站点酸化的分析,适用于复杂的翻译后修饰网络.