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相关概念视频

Cooperative Binding of Transcription Regulators02:13

Cooperative Binding of Transcription Regulators

Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome.  Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form dimers that...
Cis-regulatory Sequences02:02

Cis-regulatory Sequences

Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
DNA Bacteriophages01:26

DNA Bacteriophages

Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
CRISPR and crRNAs02:53

CRISPR and crRNAs

Bacteria and archaea are susceptible to viral infections just like eukaryotes; therefore, they have developed a unique adaptive immune system to protect themselves. Clustered regularly interspaced short palindromic repeats and CRISPR-associated proteins (CRISPR-Cas) are present in more than 45% of known bacteria and 90% of known archaea.
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
DNA as a Genetic Template02:05

DNA as a Genetic Template

Two structural features of the DNA molecule provide a basis for the mechanisms of heredity: the four nucleotide bases and its double-stranded nature. The Watson-Crick model of double-helical DNA structure, proposed in 1952, drew heavily upon the X-ray crystallography work of researchers Rosalind Franklin and Maurice Wilkins. Watson, Crick, and Wilkins jointly received the Nobel Prize in Physiology or Medicine for their work in 1962. Franklin was, controversially, excluded from the prize for...

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相关实验视频

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DNA-Tethered RNA Polymerase for Programmable In vitro Transcription and Molecular Computation
09:26

DNA-Tethered RNA Polymerase for Programmable In vitro Transcription and Molecular Computation

Published on: December 29, 2021

一个简单的密码控制了TAL效应器对DNA的识别.

Matthew J Moscou1, Adam J Bogdanove

  • 1Department of Plant Pathology and Bioinformatics and Computational Biology Program, Iowa State University, Ames, IA 50011, USA.

Science (New York, N.Y.)
|November 26, 2009
PubMed
概括

来自Xanthomonas细菌的TAL效应器与宿主DNA结合,导致疾病. 在TAL效应器中,一个重复变量的残留物对直接决定了DNA标的特异性,揭示了一个新的识别机制.

科学领域:

  • 分子生物学分子生物学
  • 植物病理学 植物病理学
  • 遗传学 是一个遗传学.

背景情况:

  • TAL效应体是Xanthomonas细菌分泌的蛋白质,它们与宿主植物DNA结合.
  • 这些效应体通过激活或抑制宿主基因,在植物病原发生过程中发挥着至关重要的作用.
  • 通过可变的重复来确定TAL效应器DNA结合的特异性,但识别机制仍然不清楚.

研究的目的:

  • 阐明TAL效应器识别和结合特定DNA位的机制.
  • 了解TAL效应器中变量重复如何赋予DNA目标特异性.
  • 探索这种理解在研究和生物技术中的潜在应用.

主要方法:

  • 分析TAL效应器重复区域及其DNA目标之间的结构和功能关系.
  • 重复变量的残留物的位点定向突变发生,以评估它们对DNA结合特异性的影响.
  • 在体外和体内测试以确认DNA-蛋白相互作用和功能后果.

主要成果:

  • 在每个TAL效应器重复中,特定的一对残留物与目标DNA核酸之间建立了直接相关性.
  • 这种残留-核酸配对功能独立于周围的DNA序列.
  • 这些发现揭示了以前未被描述的蛋白质-DNA识别机制.

更多相关视频

Stimulation of Cytoplasmic DNA Sensing Pathways In Vitro and In Vivo
11:44

Stimulation of Cytoplasmic DNA Sensing Pathways In Vitro and In Vivo

Published on: September 18, 2014

Super-Resolution Imaging of Bacterial Secreted Proteins Using Genetic Code Expansion
13:11

Super-Resolution Imaging of Bacterial Secreted Proteins Using Genetic Code Expansion

Published on: February 10, 2023

相关实验视频

Last Updated: Jun 18, 2026

DNA-Tethered RNA Polymerase for Programmable In vitro Transcription and Molecular Computation
09:26

DNA-Tethered RNA Polymerase for Programmable In vitro Transcription and Molecular Computation

Published on: December 29, 2021

Stimulation of Cytoplasmic DNA Sensing Pathways In Vitro and In Vivo
11:44

Stimulation of Cytoplasmic DNA Sensing Pathways In Vitro and In Vivo

Published on: September 18, 2014

Super-Resolution Imaging of Bacterial Secreted Proteins Using Genetic Code Expansion
13:11

Super-Resolution Imaging of Bacterial Secreted Proteins Using Genetic Code Expansion

Published on: February 10, 2023

结论:

  • 该研究确定了基于重复变量的残留物对TAL效应器DNA结合特异性的简单,直接的代码.
  • 这种机制解释了TAL效应器如何实现精确的DNA向.
  • 这些发现可以准确地预测TAL效应器目标站点,并为新型生物技术工具开辟道路.