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Updated: Jun 18, 2026

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Chemical Triphosphorylation of Oligonucleotides
Published on: June 2, 2022
广泛发生的自我分裂的 ribozymes 的发生
Chiu-Ho T Webb1, Nathan J Riccitelli, Dana J Ruminski
1Department of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697 USA.
概括
类似于型肝炎病毒 (HDV) 的 ribozymes 是一种自我分裂的 RNA,在各种生物体中广泛存在. 这些丰富的 ribozymes 表明重要的,但尚未探索,生物功能.
科学领域:
- 分子生物学分子生物学
- 在RNA生物学,RNA生物学.
- 基因组学就是基因组学.
背景情况:
- 肝炎三角病毒 (HDV) 和细胞质多基化元素结合蛋白3 (CPEB3) рибо酶是自我分裂的RNA.
- 它们共享了一个保存的嵌套双伪结结构,最小的序列保存.
研究的目的:
- 为了识别形成类似HDV的 ribozyme 折叠的新序列.
- 研究自然界中这些 ribozymes 的分布和生物活性.
主要方法:
- 使用基于二次结构的计算搜索来识别潜在的 ribozyme 序列.
- 实验室试验用于确认已识别的序列的自我裂变活性.
- 进行了序列同质性搜索,以扩大各种类型的发现.
主要成果:
- 在海洋生物,线虫,关节动物,细菌和昆虫病毒中发现了活性的HDV类核酶.
- 这些核酶还在植物,真菌和单细胞真核生物中发现.
- 在早期发育阶段观察到Anopheles gambiae的差异表达和自我切割活动.
结论:
- 类似于高强度病毒的 ribozymes 在整个自然界中广泛分布.
- 这些自我分裂RNAs的丰富和多样化的表达表明它们具有多样化和重要的生物学作用.
相关概念视频
Ribozymes
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...
Ribozymes can be...
Ribozymes
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can be...
Ribozymes can be...
Riboswitches
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
Ribosome Profiling
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique helps...
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique helps...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...

