用工程表面电荷对蛋白质中埋藏的电离组进行调制
Angel L Pey1, David Rodriguez-Larrea, Jose A Gavira
1Facultad de Ciencias, Departamento de Quimica Fisica, Universidad de Granada, 18071-Granada, Spain.
Journal of the American Chemical Society
|January 9, 2010
概括
蛋白质可以耐受突变,它们的埋藏电荷可以通过表面电荷设计来控制. 这种蛋白质工程方法为蛋白质中的电荷埋葬提供了新的可能性.
科学领域:
- 生物化学 生物化学
- 蛋白质工程是指蛋白质工程.
- 结构生物学 结构生物学
背景情况:
- 蛋白质可以适应疏水性到离子化残留的突变.
- 了解埋藏的电离组的行为对于蛋白质功能至关重要.
研究的目的:
- 通过实验证明表面电荷分布可以调节埋藏的电离组.
- 在蛋白质工程中探索电荷埋葬的潜力.
主要方法:
- 蛋白质表面电荷分布的合理设计.
- 埋藏的电离群特性 (pK,质子化状态,局部动态) 的实验性表征.
主要成果:
- 表面电荷调制有效地改变了埋藏的电离组的pK值.
- 质子状态和埋藏残留物的局部动力学受到显著影响.
- 通过合理设计证明了基本属性的高效调制.
结论:
- 蛋白质表面电荷工程是一种可行的策略,可以控制埋藏的电离组属性.
- 这种方法为蛋白质工程和利用电荷埋葬提供了新的途径.
- 能够为特定应用微调蛋白质特性.
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Covalently Linked Protein Regulators
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
These groups modify specific amino acids in a protein.
Ligand Binding Sites
Proteins are dynamic macromolecules that carry out a wide variety of essential processes; however, the activities of most proteins depend on their interactions with other molecules or ions, known as ligands.
Protein-ligand interactions are quite specific; even though numerous potential ligands surround a cellular protein at any given time, only a particular ligand can bind to that protein. Moreover, a ligand binds only to a dedicated area on the surface of the protein, known as the...
Protein-ligand interactions are quite specific; even though numerous potential ligands surround a cellular protein at any given time, only a particular ligand can bind to that protein. Moreover, a ligand binds only to a dedicated area on the surface of the protein, known as the...
Protein Folding
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Folding
Overview
Phosphorylation
The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
Protein Kinases and Phosphatases
Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...


