酵母和人类TFIID之间的功能差异局限于高度保护的区域
B P Cormack1, M Strubin, A S Ponticelli
1Department of Biological Chemistry, Harvard Medical School, Boston, Massachusetts 02115.
Cell
|April 19, 1991
概括
尽管保留了核心域,但人类的TFIID (转录因子II D) 支持酵母菌的生长很差. 核心域内的特定物种差异,而不是N终端区域,导致转录因子活性的功能区别.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物化学 生物化学
背景情况:
- 转录因子II D (TFIID) 是一种高度保守的通用转录因子,对真核生物基因表达至关重要.
- 在真核生物中,TFIID的核心域具有高序列相同性 (>80%) 和类似的生化特性.
研究的目的:
- 为了研究酵母和人类TFIID之间的功能差异,尽管它们的核心域被保留了.
- 在TFIID中确定负责酵母菌中特定物种功能不相容性的特定区域.
主要方法:
- 对表达人类TFIID和酵母-人类杂交TFIID结构的酵母细胞的功能分析.
- 评估细胞生长作为测量TFIID功能 in vivo.
- 对核心领域区域进行比较分析,以精确确定功能决定因素.
主要成果:
- 与具有内源性酵母TFIID的酵母细胞相比,表达人类TFIID的酵母细胞的生长严重受损.
- TFIID的N终端区域对于酵母细胞活力并不重要,因为只有核心域支持生长.
- 在TFIID的核心保护区域内,特定的区域负责观察到的特定物种的功能差异.
结论:
- 酵母和人类TFIID之间的功能不兼容是由于它们保存的核心领域内的变异引起的.
- 这些TFIID的特定物种差异可能来自改变的DNA结合亲缘关系或与转录机械组件的明显相互作用.
- 了解这些变异可以了解基本转录过程的演变和调节.
相关概念视频
Transcription Factors
70.6K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
70.6K
Conserved Binding Sites
4.1K
Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally...
4.1K
Protein Complexes with Interchangeable Parts
2.1K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.1K
Histone Variants at the Centromere
4.0K
Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3...
4.0K
Transfer RNA Synthesis
10.2K
One of the unique features of tRNA is the presence of modified bases. In some tRNAs, modified bases account for nearly 20% of the total bases in the molecule. Altogether, these unusual bases protect the tRNA from enzymatic degradation by RNases.
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
10.2K
General Transcription Factors
5.9K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.9K


