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相关概念视频

From DNA to Protein03:06

From DNA to Protein

The flow of genetic information in cells from DNA to mRNA to protein is described by the central dogma, which states that genes specify the sequence of mRNAs, which in turn specify the sequence of amino acids making up all proteins. The decoding of one molecule to another is performed by specific proteins and RNAs. Because the information stored in DNA is so central to cellular function, it makes intuitive sense that the cell would make mRNA copies of this information for protein synthesis...
Leaky Scanning02:28

Leaky Scanning

During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Initiation of Translation02:33

Initiation of Translation

Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
Initiation of Translation02:33

Initiation of Translation

Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
Improving Translational Accuracy02:07

Improving Translational Accuracy

Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
Improving Translational Accuracy02:07

Improving Translational Accuracy

Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...

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相关实验视频

Updated: Jun 13, 2026

Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation
12:26

Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation

Published on: February 12, 2022

编码子顺序在翻译动态中的作用

Gina Cannarozzi1, Gina Cannarrozzi, Nicol N Schraudolph

  • 1Institute of Computational Science, ETH Zurich, 8092 Zurich, Switzerland.

Cell
|April 21, 2010
PubMed
概括

基因表达受代码子选择的影响. 这项研究表明,细胞更喜欢使用相同的转移RNA (tRNA) 来重复氨基酸,从而影响翻译速度并留下基因组签名.

科学领域:

  • 分子生物学分子生物学
  • 基因组学就是基因组学.
  • 生物物理学的生物物理.

背景情况:

  • 遗传密码是退化的,多个编码子编码一个单一的氨基酸.
  • 众所周知,的选择会影响基因表达水平.
  • 同义代码子使用的精确机制和基因组含义仍然是活跃的研究领域.

研究的目的:

  • 为了调查同义代码的使用是否在编码序列中是随机的或有偏见的.
  • 为了确定代使用模式是否与转移RNA (tRNA) 的可用性和使用相关.
  • 阐明编码核对应对翻译动态和基因组签名的影响.

主要方法:

  • 分析S. cerevisiae编码序列中的codon使用模式.
  • 对同名编码子发生及其相关tRNA的相关性分析.
  • 对相关与反相关的密码子序列进行比较的翻译速度测试.

主要成果:

  • 同义代码的使用是非随机的;相同氨基酸的后续代码有利于相同的tRNA.
  • 这种编码子-tRNA相关性在快速诱导的基因中更加明显.
  • 与反相关序列相比,Codon相关性显著加快了翻译速度.
  • 证据表明tRNA扩散速度较慢,并有可能在核糖体中道化tRNA.

更多相关视频

Xenopus laevis as a Model to Identify Translation Impairment
10:24

Xenopus laevis as a Model to Identify Translation Impairment

Published on: September 27, 2015

Isolation of Ribosome Bound Nascent Polypeptides in vitro to Identify Translational Pause Sites Along mRNA
10:15

Isolation of Ribosome Bound Nascent Polypeptides in vitro to Identify Translational Pause Sites Along mRNA

Published on: July 6, 2012

相关实验视频

Last Updated: Jun 13, 2026

Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation
12:26

Optical Tweezers to Study RNA-Protein Interactions in Translation Regulation

Published on: February 12, 2022

Xenopus laevis as a Model to Identify Translation Impairment
10:24

Xenopus laevis as a Model to Identify Translation Impairment

Published on: September 27, 2015

Isolation of Ribosome Bound Nascent Polypeptides in vitro to Identify Translational Pause Sites Along mRNA
10:15

Isolation of Ribosome Bound Nascent Polypeptides in vitro to Identify Translational Pause Sites Along mRNA

Published on: July 6, 2012

结论:

  • 翻译的动态在基因组中留下了重要的,非随机的签名.
  • Codon使用偏差被积极调节以优化翻译效率.
  • 核糖体相关的tRNA动态在基因表达调节中起着至关重要的作用.