在膜-水接口的分子识别:通过非膜核基配对来控制集成螺旋
Philipp Erik Schneggenburger1, Stefan Müllar, Brigitte Worbs
1Institute for Organic and Biomolecular Chemistry, Georg-August-University Göttingen, 37077 Göttingen, Germany.
Journal of the American Chemical Society
|May 21, 2010
概括
研究人员用核酸 (PNA) 设计了新的跨膜,以控制它们的聚合. 这项研究展示了使用这些型模型系统研究膜蛋白组合和功能的新方法.
科学领域:
- 生物化学和生物物理学
- 膜蛋白研究研究 膜蛋白研究
- 合成化學合成化學
背景情况:
- 膜蛋白和跨膜聚合是复杂的,受脂质环境的影响,因此很难预测.
- 型模型系统为研究膜相关过程提供了一种合成可访问和可修改的方法.
- 通过改变TMD接口或使用外部识别单元来控制跨膜域 (TMD) 组件.
研究的目的:
- 设计和合成与核酸 (PNA) 功能化的双螺旋跨膜域.
- 为了研究膜相邻识别对TMD组件的影响,使用Förster共振能量转移 (FRET).
- 为了探索对TMD二元体/单元体比率的温度依赖控制.
主要方法:
- 基于格拉米西丁A孔纹的双螺旋式跨膜域的设计和合成.
- 跨膜的共价功能化与极性核酸 (PNA) 识别单元.
- 附加用于FRET测量的光探针,以研究单状脂囊中的二分化.
主要成果:
- 成功设计和合成跨膜/PNA合物.
- 在脂质囊泡内观察TMD二元体的形成.
- 证明TMDs的二聚子/单聚子比可以通过温度调节.
结论:
- 具有外部识别单元的功能化跨膜提供了一个可控制的系统,用于研究膜蛋白组合.
- 开发的型模型系统允许研究由外部相互作用影响的与膜相关的过程.
- 温度作为一个可行的参数来调节跨膜域的聚合状态.
相关概念视频
Multi-pass Transmembrane Proteins and β-barrels
In multi-pass transmembrane proteins, the polypeptide chain crosses the membrane more than once. The transmembrane polypeptide chain either forms an α-helix or β-strand structure. α-Helix containing multi-pass transmembrane proteins are ubiquitous, whereas β-strand containing ones are mainly found in gram-negative bacteria, mitochondria, and chloroplasts.
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
Aquaporins
Aquaporins or AQPs are a family of integral membrane proteins whose primary function is to transport water, while some called aquaglyceroporins also transport glycerol. In addition, aquaporins have also been suspected to be involved in transporting volatile substances, such as carbon dioxide and ammonia, across membranes. Such AQPs that act as gas channels are often highly expressed in cells involved in the gaseous exchange, such as red blood cells, epithelial cells, and pulmonary capillaries.
Protein-protein Interfaces
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a polypeptide...
Mechanisms of Membrane Domain Formation
Different physical properties of lipids and proteins allow them to localize and form distinct islands or domains in the membrane. Some membrane domains are formed due to protein-protein interactions, whereas others are formed due to the presence of specific lipids such as sphingolipids and sterols—for example, large proteins, such as bacteriorhodopsin, aggregate and create distinct domains.
Another mechanism for membrane domain formation involves membrane proteins interacting with cytoskeletal...
Another mechanism for membrane domain formation involves membrane proteins interacting with cytoskeletal...
Single-pass Transmembrane Proteins
Integral membrane proteins are tightly associated with the cell membrane and play a crucial role in cell communication, signaling, adhesion, and transport of the molecules. Some integral membrane proteins are present only in the membrane monolayer. For example, the enzyme fatty acid amide hydrolase is present in the cytoplasmic side of the membrane monolayer. In contrast, another type of integral membrane protein, also known as a transmembrane protein, spans across the membrane. Transmembrane...
Membrane Proteins
Plasma membranes have integral transmembrane proteins involved in facilitated transport. These proteins are collectively referred to as transport proteins, and they function as either channels for the material or as carriers themselves. Channel proteins have hydrophilic domains exposed to the intracellular and extracellular fluids and a hydrophilic channel through their core that provides a hydrated opening for solutes to pass through the membrane layers. Passage through the channel allows...


