在不同的人群中整合常见和罕见的遗传变异
1, David M Altshuler, Richard A Gibbs
1Broad Institute, 7 Cambridge Center, Cambridge, Massachusetts 02138, USA. altshuler@molbio.mgh.harvard.edu
Nature
|September 3, 2010
概括
哈普地图3资源提供了人类遗传变异的全面地图,包括跨多种人群的常见和罕见等位基因. 这使得人们能够更深入地了解基因组变异.
科学领域:
- 基因组学就是基因组学.
- 人口遗传学 人口遗传学
- 人类疾病遗传学 人类疾病遗传学
背景情况:
- 鉴定人类疾病的遗传变体至关重要,但许多遗传风险仍然无法解释.
- 理解需要全基因组研究,检查不同祖先群体中不太常见的等位基因.
研究的目的:
- 创建一个综合数据集的常见和罕见的遗传变异 (HapMap 3) 对于不同的人口.
- 为全基因组关联研究 (GWAS) 的设计和解释提供信息.
主要方法:
- 在11个全球人口中的1,184个个体中,基因型为160万个常见单核酸多态 (SNP).
- 在692个个体中测序了10个100千基区域.
- 综合数据包括SNP和复制数多态 (CNP).
主要成果:
- 低频变异的特征性人群特异性差异.
- 使用较大的参考面板,提高了小等位基因频率≤5%的SNP的归算精度.
- 证明了归因新发现的CNP和SNP的可行性.
结论:
- 哈普地图3资源扩大了公众对全球人口的基因组变异的访问权限.
- 支持对基因组变异在人类疾病中的作用进行更深入的调查.
- 代表着迈向人类遗传变异的高分辨率地图的一步.
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