Upf1 感知 3'UTR 长度,以增强 mRNA 衰变的潜力
J Robert Hogg1, Stephen P Goff
1Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA. jh2721@columbia.edu
Cell
|October 30, 2010
概括
无意中介衰变 (NMD) 降解了有缺陷的mRNA. 这项研究揭示了一种两步Upf1依赖的机制,用于降解具有长3'未翻译区域 (3'UTRs) 的mRNA,受翻译终结效率的影响.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 在RNA生物学,RNA生物学.
背景情况:
- 无意中介衰变 (NMD) 是细胞质量控制的关键mRNA监测途径.
- 对NMD的失调与各种人类疾病有关.
- 在NMD中3'未翻译区域 (3'UTR) 长度的作用尚未完全理解.
研究的目的:
- 阐明由长3'UTRs介导的Upf1-依赖的mRNA降解的机制.
- 为了研究翻译阅读,3'UTR长度和NMD之间的相互作用.
- 为3'UTR长度监控提出一个模型.
主要方法:
- 利用RNA头标记的mRNA来净化信使核糖核蛋白.
- 研究了Upf1与含有HIV-1 3'UTR序列的mRNA的相关性.
- 分析了促进翻译阅读的逆转录病毒RNA元素对Upf1招募和RNA衰变的影响.
主要成果:
- 发现了长3'UTRs的mRNAs的Upf1-依赖性降解的两步机制.
- 证明Upf1以3'UTR长度依赖的方式与mRNA结合.
- 显示翻译阅读对抗Upf1招募和随后的RNA衰变,将3'UTR长度识别与衰变启动脱.
结论:
- 提出了一个3'UTR长度监测模型,其中Upf1平衡结合先于对RNA衰变的承诺.
- 强调了翻译终止效率在NMD调节中的监管作用.
- 强调了mRNA质量控制途径在人类健康和疾病中的重要性.
相关概念视频
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
mRNA Stability and Gene Expression
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability
mRNA Stability and Gene Expression
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability
Nuclear Export of mRNA
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
RNA Stability
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...


