动物基因调节网络的新兴特性
1Division of Biology 156-29, California Institute of Technology, Pasadena, California 91125, USA. Davidson@caltech.edu
Nature
|December 18, 2010
概括
基因调控网络 (GRNs) 通过基因组代码来解释生物功能. 它们的结构和模块化子电路为开发和进化提供了洞察力.
科学领域:
- 基因组学就是基因组学.
- 系统生物学 系统生物学
- 发展生物学 发展生物学
背景情况:
- 基因调节网络 (GRNs) 对于通过基因调节代码了解生物功能至关重要.
- GRN 根据发育角色表现出不同的层次结构和模块化子电路.
研究的目的:
- 探索GRN结构和功能之间的关系.
- 突出数学建模在理解GRN子电路中的实用性.
- 阐明GRN组织如何告知发展和进化过程.
主要方法:
- 对GRN结构组织的分析.
- 对GRN子电路的数学建模.
- 不同GRN类型的比较研究.
主要成果:
- GRN的结构复杂性与发育功能相关.
- 在不同的GRN中使用一个共同的子电路列表.
- 数学模型增强了对特定GRN子电路函数的理解.
结论:
- GRNs的结构组织与它们在生命过程中的角色密切相关.
- GRN架构为发育和进化轨迹提供因果解释.
- 了解GRN的模块化和层次结构是解读生物复杂性的关键.
相关概念视频
Combinatorial Gene Control
Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression at Multiple Steps
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...
Reporter Genes
Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
Commonly used reporter...
Commonly used reporter...
Cis-regulatory Sequences
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...


