大型多域积分膜蛋白上的固态NMR:外膜蛋白组装因子BamaA
Marie Renault1, Martine P Bos, Jan Tommassen
1Bijvoet Center for Biomolecular Research, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands.
Journal of the American Chemical Society
|March 3, 2011
概括
固态核磁共振 (ssNMR) 能够对大型,灵活的多域膜蛋白进行结构分析. 该技术用于研究Bama蛋白的折叠,揭示其结构元素和动态.
科学领域:
- 生物化学 生物化学
- 结构生物学 结构生物学
- 生物物理学的生物物理.
背景情况:
- 多域蛋白对细胞功能至关重要,但由于大小和灵活性,很难从结构上进行表征.
- 了解大型多域膜蛋白的结构对于阐明它们的生理作用至关重要.
研究的目的:
- 开发和应用运动过的固态NMR (ssNMR) 方法,用于对大型多域膜蛋白进行结构分析.
- 研究790残留Bama蛋白的折叠和结构特征,这是细菌外膜蛋白组装机器的关键组成部分.
主要方法:
- 使用运动过的高分辨率固态NMR (ssNMR) 实验.
- 应用了基于二极和标尺的二维ssNMR技术,对均标记的 (13) C,(15) N的Bama变种进行了应用.
- 在类似本地环境中分析了原子级结构信息.
主要成果:
- 证明了ssNMR能够观察和分析具有多种运动时间尺度的非常大的多域膜蛋白的能力.
- 在Bamma跨膜段及其POTRA域内确定了特征性的二次结构元素.
- 在Bama蛋白的不同区域揭示了不同的动态.
结论:
- 运动过的ssNMR提供了一种获得大型多域 (膜) 蛋白质原子级结构洞察力的一般策略.
- 该研究成功地描述了复杂的Bama蛋白的结构特征和动态.
- 这种方法有助于研究具有挑战性的蛋白质点在它们的本地环境中.
相关概念视频
Mechanisms of Membrane Domain Formation
Different physical properties of lipids and proteins allow them to localize and form distinct islands or domains in the membrane. Some membrane domains are formed due to protein-protein interactions, whereas others are formed due to the presence of specific lipids such as sphingolipids and sterols—for example, large proteins, such as bacteriorhodopsin, aggregate and create distinct domains.
Another mechanism for membrane domain formation involves membrane proteins interacting with cytoskeletal...
Another mechanism for membrane domain formation involves membrane proteins interacting with cytoskeletal...
Multi-pass Transmembrane Proteins and β-barrels
In multi-pass transmembrane proteins, the polypeptide chain crosses the membrane more than once. The transmembrane polypeptide chain either forms an α-helix or β-strand structure. α-Helix containing multi-pass transmembrane proteins are ubiquitous, whereas β-strand containing ones are mainly found in gram-negative bacteria, mitochondria, and chloroplasts.
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
Membrane Domains
The membrane domains concentrate specific lipids and proteins at one place within the membrane, which helps in cell signaling, adhesion, and other critical cellular processes. These domains can differ in size, composition, function, and lifespan.
Protein Domains
The membrane comprises a group of distinct proteins responsible for carrying out a cell's specific function. For example, the plasma membrane of the human sperm, or a single germ cell, contains a unique set of proteins in the anterior...
Protein Domains
The membrane comprises a group of distinct proteins responsible for carrying out a cell's specific function. For example, the plasma membrane of the human sperm, or a single germ cell, contains a unique set of proteins in the anterior...
Structure of Porins
Mitochondria, chloroplasts, and gram-negative bacteria have transmembrane, beta-barrel proteins called porins to mediate the free diffusion of ions and metabolites across the membrane. Mitochondrial porin precursors contain conserved amino acid sequences called beta signals at their C-terminal. Beta signals have a motif of PoXGXXHyXHy (Po-Polar, X-Any amino acid, G-Glycine, Hy-LargeHydrophobic), which are crucial for precursor recognition to initiate precursor assembly. Beta-barrel precursors...

