哺乳动物基因表达控制的全球量化
Björn Schwanhäusser1, Dorothea Busse, Na Li
1Max Delbrück Center for Molecular Medicine, Robert-Rössle-Str. 10, D-13092 Berlin, Germany.
Nature
|May 20, 2011
概括
这项研究量化了哺乳动物细胞的基因表达,揭示了蛋白质丰富性主要由翻译控制,而不仅仅是mRNA水平. 它提供了对mRNA和蛋白质合成和周转的全基因组视图.
科学领域:
- 分子生物学分子生物学
- 系统生物学 系统生物学
- 基因组学就是基因组学.
背景情况:
- 基因表达对生命至关重要,涉及转录,翻译和mRNA和蛋白质的周转.
- 之前的研究缺乏整个基因表达级联的全基因组定量数据.
研究的目的:
- 同时量化哺乳动物细胞中超过5000个基因的绝对mRNA和蛋白质丰度和周转率.
- 开发一个基因组规模模型,预测mRNA和蛋白质合成速率.
- 了解管理基因表达的调控原则.
主要方法:
- 并行代谢脉冲标记以测量mRNA和蛋白质的丰度和周转.
- 量化建模用于预测合成速率.
- 在哺乳动物细胞中分析了5000多个基因.
主要成果:
- mRNA和蛋白质水平显示出比预期更强的相关性,但它们的半衰期没有相关性.
- 首次实现了对mRNA和蛋白质合成速率的基因组规模预测.
- 细胞蛋白质的丰富性主要在翻译水平上受到调节.
- 具有相似mRNA和蛋白质稳定性的基因表现出共同的功能性质.
结论:
- 蛋白质丰度主要通过转化调节来控制.
- 基因表达动态受能量和动态约束的影响.
- 这项研究为了解基因表达设计原则提供了定量,全基因组的资源.
相关概念视频
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Combinatorial Gene Control
Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
Reporter Genes
Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
Commonly used reporter...
Commonly used reporter...
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression at Multiple Steps
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...
Constitutive and Regulated Gene Expression
Gene expression in prokaryotes is governed by constitutive and regulated systems, allowing cells to balance the production of essential proteins with adaptive responses to environmental changes.Constitutive Gene ExpressionConstitutive, or housekeeping, genes are continuously expressed as they encode proteins vital for fundamental cellular processes. These include enzymes for glycolysis, ribosomal components for protein synthesis, and proteins involved in DNA replication. Their constant...


