在氨酸-4上酸化的RNAP II CTD是基因组 mRNA 3'终端处理所需的
Jing-Ping Hsin1, Amit Sheth, James L Manley
1Department of Biological Sciences, Columbia University, New York, NY 10027, USA.
概括
对RNA聚合酶II C终端域 (CTD) Thr(4) 的酸化对于基因组 mRNA 处理至关重要. 这种修改需要CDK9,有助于将处理因子招募到基因组基因中,以获得高效的基因表达.
科学领域:
- 分子生物学分子生物学
- 基因表达规范 基因表达规范
背景情况:
- RNA聚合酶II C-终端域 (CTD) 具有重复的重复特征,具有关键的酸化位点.
- 血清二,五和七酸化调节转录和mRNA前体的处理.
研究的目的:
- 研究CTD Thr(4) 酸化在基因表达中的作用.
- 要确定Thr(4) 酸化是否参与特定的mRNA处理事件.
主要方法:
- 研究了与mRNA处理有关的CTD酸化模式.
- 利用遗传学和生物化学方法研究CTD Thr(4) 酸化的功能.
- 研究了Thr(4) 酸化的进化保存.
主要成果:
- CTD Thr(4) 酸化特别需要用于基因组 mRNA 3' 端处理.
- 化促进了3'处理因子对基因组基因的招募.
- 这种修改需要CTD激酶CDK9,并且在各种物种中保持.
结论:
- CTD Thr(4) 酸化在基因基因表达中起着特定的作用.
- 这种修改对于有效的基因组mRNA处理和因子招募至关重要.
- CTD修改提供了微调基因表达的机制.
相关概念视频
Chromatin Structure Regulates pre-mRNA Processing
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
Eukaryotic RNA Polymerases
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
Transfer RNA Synthesis
One of the unique features of tRNA is the presence of modified bases. In some tRNAs, modified bases account for nearly 20% of the total bases in the molecule. Altogether, these unusual bases protect the tRNA from enzymatic degradation by RNases.
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
Pre-mRNA Processing: Modification of pre-mRNA Ends
In eukaryotic cells, transcripts made by RNA polymerase are modified and processed before exiting the nucleus. Unprocessed RNA is called precursor mRNA or pre-mRNA to distinguish it from mature mRNA.
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps the cell...
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps the cell...
pre-mRNA Processing
In eukaryotic cells, transcripts made by RNA polymerase are modified and processed before exiting the nucleus. Unprocessed RNA is called precursor mRNA or pre-mRNA to distinguish it from mature mRNA.
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a “cap” to the 5’ end of the growing transcript. In this process, a 5’ phosphate is replaced by modified guanosine that has a methyl group attached to it (7-Methyl guanosine). This 5’ cap helps the...
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a “cap” to the 5’ end of the growing transcript. In this process, a 5’ phosphate is replaced by modified guanosine that has a methyl group attached to it (7-Methyl guanosine). This 5’ cap helps the...
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...


