在基因调节和基因组不稳定性中的RNA聚合酶回溯
1Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA. evgeny.nudler@nyumc.org
Cell
|June 26, 2012
概括
RNA聚合酶逆行是酶沿着DNA和RNA滑动的一个关键机制. 这一过程对于调节基因表达和维持细菌和真核生物的基因组稳定性至关重要.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物化学 生物化学
背景情况:
- RNA聚合酶作为一个分子电机.
- 该酶在生产性和回溯性形式之间表现出动态状态过渡.
- 15年来,RNA聚合酶的回溯已经得到了认可.
研究的目的:
- 为了阐明RNA聚合酶回溯的意义.
- 探索回溯在各种细胞过程中的作用.
- 了解回溯对基因组稳定性的影响.
主要方法:
- 关于RNA聚合酶回溯的文献综述.
- 对现有关于转录调节的研究进行分析.
- 在 prokaryotes 和 eukaryotes 中逆行的比较研究.
主要成果:
- 回溯是一种跨物种保存的机制.
- 它在转录延长控制中起着至关重要的作用.
- 回溯影响了基因暂停,终止和忠实性.
结论:
- RNA聚合酶逆行是基因表达调节的基础.
- 这一过程与保持基因组完整性有关.
- 对回溯机制的进一步研究可以揭示与基因组不稳定性相关的疾病的见解.
相关概念视频
Restarting Stalled Replication Forks
DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart, a...
Proofreading
Synthesis of new DNA molecules is carried out by the enzyme DNA polymerase, which adds nucleotides on the daughter strand complementary to the template DNA strand. DNA polymerase has a higher affinity to add the correct base and ensures fidelity during DNA replication. Furthermore, it exhibits proofreading activity during replication, using an exonuclease domain that cuts off incorrect nucleotides from the nascent DNA strand.
Errors During Replication are Corrected by the DNA Polymerase Enzyme
Errors During Replication are Corrected by the DNA Polymerase Enzyme
Proofreading
Overview
Genome Copying Errors
DNA replication is a well-evolved process that copies millions of base pairs with high fidelity during each cell division. Occasionally a wrong base or a long stretch of wrong bases may get added to the daughter strands. If the errors are left unchecked, cells might accumulate several mutations that might endanger their survival. Therefore, the copying errors are checked and repaired at three levels.
Translesion DNA Polymerases
Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
The DNA Replication Fork
An organism’s genome needs to be duplicated in an efficient and error-free manner for its growth and survival. The replication fork is a Y-shaped active region where two strands of DNA are separated and replicated continuously. The coupling of DNA unzipping and complementary strand synthesis is a characteristic feature of a replication fork. Organisms with small circular DNA, such as E. coli, often have a single origin of replication; therefore, they have only two replication forks, one in...

