染色体重塑剂的全基因组核细胞特异性和定向性
Kuangyu Yen1, Vinesh Vinayachandran, Kiran Batta
1Department of Biochemistry and Molecular Biology, Center for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, PA 16802, USA.
Cell
|June 26, 2012
概括
像SWI/SNF和Isw2这样的染色体重塑剂合作,在基因开始和结束地点精确地定位核细胞. 这种协调的作用将核体组织成功能阵列,影响基因调节.
科学领域:
- 分子生物学分子生物学
- 遗传学 遗传学 是一个
- 染色体生物学 染色体生物学
背景情况:
- 核细胞组织对于基因调节至关重要.
- 染色体重塑剂在基因末端组织核细胞的合作机制在很大程度上是未知的.
- 了解重塑器的功能是解读基因组可访问性的关键.
研究的目的:
- 为了确定多重染色体重塑复合物的全基因组结合模式.
- 阐明这些重塑剂在基因调节区域的核细胞定位中的功能性作用.
- 为了研究Isw2重塑复合物的亚核体组织.
主要方法:
- 使用超高分辨率的ChIP-exo.80进行全基因组重塑复合物 (SWI/SNF,RSC,ISW1a,ISW1b,ISW2,INO80) 的映射.
- 删除分析,以评估重塑剂对核细胞定位的功能贡献.
- 生物化学和晶体学建模以了解Isw2亚核体组织.
主要成果:
- 特定的重塑复合体结合于基因的5'和3'末端的核细胞体位置.
- 改造者表现出定向性,将核体从或向没有核体的区域移动.
- Isw2复合体显示了一个亚核体组织,与将其置于促进子区域的模型相一致.
结论:
- 染色体重塑剂以特定位置的方式合作组织基因核细胞.
- 这种协调的行动建立了基因调节所必需的核组.
- 这些发现为了解重塑者如何建立染色体景观提供了一个框架.
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