一个α螺旋到β桶域开关将转录因子RfaH转化为转化因子
Björn M Burmann1, Stefan H Knauer, Anastasia Sevostyanova
1Lehrstuhl Biopolymere und Forschungszentrum für Bio-Makromoleküle, Universität Bayreuth, Universitätsstraße 30, 95447 Bayreuth, Germany.
Cell
|July 24, 2012
概括
细菌转录因子NusG和RfaH具有相似的N终端域,但它们的C终端域不同. 释放的RfaH C-终端域重新折叠成β-桶结构,增强特定操作子的翻译.
科学领域:
- 分子生物学分子生物学
- 微生物学 微生物学
- 遗传学 是一个遗传学.
背景情况:
- NusG同类物是所有生物体中转录和合过程的关键调节者.
- 大肠杆菌 (E. coli) 具有两种NusG类型,NusG和RfaH,具有不同的C端域 (CTD),但相同的N端域 (NTD).
- 这两种NTD都与延长RNA聚合酶 (RNAP) 结合,以减轻转录暂停.
研究的目的:
- 研究RfaH CTD在从NTD释放后的结构变化.
- 阐明RfaH CTD重新折叠对转录和翻译的功能影响.
- 将重新折叠的RfaH CTD与NusG CTD的结构和功能进行比较.
主要方法:
- 对RfaH和NusGCTD的结构分析.
- 生物化学测试以评估蛋白质与蛋白质之间的相互作用.
- 在体内研究以评估对基因表达的影响.
主要成果:
- 在从NTD释放后,RfaH CTD从α-螺旋转向β-桶形状重新折叠,模仿NusG CTD结构.
- 这种重新折叠使RfaH CTD与核糖体蛋白S10相互作用.
- 重复折叠的RfaH CTD增强了RfaH调节的操作数的翻译.
结论:
- RfaH CTD 的形状可塑性对其调节功能至关重要.
- RfaH充当了一种复杂的分子开关,将转录终止/反终止与翻译增强结合起来.
- 了解这些机制可以了解细菌基因调节和潜在的治疗点.
相关概念视频
Bacterial RNA Polymerase
19.9K
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
19.9K
Rab Proteins
4.0K
Rab proteins constitute the largest family of monomeric GTPases, of which 70 members are present in humans. Rab proteins and their effectors regulate consecutive stages of vesicle transport such as vesicle transport, docking, and fusion to the correct recipient membrane.
Rab proteins switch between a cytosolic, GDP-bound inactive state and a membrane-anchored, GTP-bound active state. By themselves, Rabs show slow rates of GDP/GTP exchange and GTP hydrolysis. Thus, Rab proteins are considered...
Rab proteins switch between a cytosolic, GDP-bound inactive state and a membrane-anchored, GTP-bound active state. By themselves, Rabs show slow rates of GDP/GTP exchange and GTP hydrolysis. Thus, Rab proteins are considered...
4.0K
Rab Cascades
2.8K
Rab GTPases act in a regulated cascade during membrane fusion, helping the lipid bilayers mix. The Rab family of proteins are active when bound to GTP, and inactive when bound to GDP. Hence, they act as guanine nucleotide-dependent molecular switches. Rab-GTP recognizes and binds to long or short-range tethering proteins to capture the target vesicle. These tethers coordinate with SNAREs on the vesicle and the target membrane to assemble the trans SNARE complex that locks the mixing bilayers.
2.8K
Small GTPases - Ras and Rho
4.4K
Ras and Rho are small monomeric GTPases that act downstream of receptor tyrosine kinase (RTK) and regulate various cellular processes. These GTPases switch between active and inactive states by binding to guanine nucleotides.
Three regulatory proteins control their activity:
Three regulatory proteins control their activity:
4.4K
Transcriptional Regulation: Riboswitches
1.2K
Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
1.2K
Translational Regulation
877
Translational regulation in prokaryotes ensures efficient protein synthesis by controlling ribosome access to mRNA. This regulation is mediated by secondary RNA structures, including translational riboswitches, RNA thermometers, and small RNAs (sRNAs), which respond to intracellular and environmental signals to modulate gene expression.Translational RiboswitchesRiboswitches in the leader region of mRNAs can regulate translation by altering the accessibility of the Shine-Dalgarno (SD) sequence,...
877


