相关实验视频
Updated: May 19, 2026

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Transmembrane Domain Oligomerization Propensity determined by ToxR Assay
Published on: May 26, 2011
跨膜螺旋蛋白二元体的多态组织由宿主膜控制
Anton A Polyansky1, Pavel E Volynsky, Roman G Efremov
1Department of Structural and Computational Biology, Max F. Perutz Laboratories, University of Vienna, Campus Vienna Biocenter 5, Vienna, AT-1030, Austria. newant@gmail.com
Journal of the American Chemical Society
|August 15, 2012
概括
细胞膜中跨膜螺旋体的二分化对于蛋白质的功能至关重要. 我们的计算模型揭示了膜环境如何影响二元体构成和稳定性,将ErbB二元化强度与致癌潜力联系起来.
科学领域:
- 生物物理学的生物物理.
- 计算生物学 计算生物学
- 结构生物学 结构生物学
背景情况:
- 跨膜 (TM) 螺旋结合对比托普蛋白的功能至关重要,特别是受体氨酸激酶 (RTKs),它们是关键的医疗标.
- 了解TM螺旋体二分化由于主要结构,膜组成和局部环境等因素而复杂.
研究的目的:
- 开发和应用一个计算框架来分析TM螺旋性双蛋白的同型和异型分子化.
- 调查膜环境对TM二元体构造和稳定性的影响.
主要方法:
- 开发了一种基于表面的新型建模方法来预测TM二元体构造.
- 在各种模型膜中采用全原子分子动力学模拟来研究二元体的行为.
- 分析了形状异质性和环境对二分化的影响.
主要成果:
- 计算框架准确地预测TM二元体构造和屏幕构造异质性.
- 特定的脂质双层优先稳定基于蛋白质结构和膜相互作用的不同二元构造.
- 蛋白质诱导的膜扰动与膜对自由能量增益的贡献相关.
结论:
- 细胞膜环境在选择特定的TM二元体构造方面发挥着重要作用.
- 在ErbB家族中的二元化强度与其致癌能力相关,为癌症机制提供了洞察力.
相关概念视频
Multi-pass Transmembrane Proteins and β-barrels
In multi-pass transmembrane proteins, the polypeptide chain crosses the membrane more than once. The transmembrane polypeptide chain either forms an α-helix or β-strand structure. α-Helix containing multi-pass transmembrane proteins are ubiquitous, whereas β-strand containing ones are mainly found in gram-negative bacteria, mitochondria, and chloroplasts.
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
α-Helix containing multi-pass transmembrane proteins
Multi-pass transmembrane proteins such as G-protein-linked receptors (GPCRs) and...
Insertion of Multi-pass Transmembrane Proteins in the RER
The rough ER membrane synthesizes, assembles, and embeds transmembrane proteins in diverse topologies. These proteins function as transporters or channels and can remain in the ER membrane or are sent to the Golgi complex, lysosome, and cell membrane.
The multipass transmembrane proteins are the type IV integral membrane proteins with multiple topogenic sequences determining their spatial arrangement in the ER membrane. Nearly all multipass proteins lack a cleavable signal sequence and use...
The multipass transmembrane proteins are the type IV integral membrane proteins with multiple topogenic sequences determining their spatial arrangement in the ER membrane. Nearly all multipass proteins lack a cleavable signal sequence and use...
Single-pass Transmembrane Proteins
Integral membrane proteins are tightly associated with the cell membrane and play a crucial role in cell communication, signaling, adhesion, and transport of the molecules. Some integral membrane proteins are present only in the membrane monolayer. For example, the enzyme fatty acid amide hydrolase is present in the cytoplasmic side of the membrane monolayer. In contrast, another type of integral membrane protein, also known as a transmembrane protein, spans across the membrane. Transmembrane...
Mechanisms of Membrane Domain Formation
Different physical properties of lipids and proteins allow them to localize and form distinct islands or domains in the membrane. Some membrane domains are formed due to protein-protein interactions, whereas others are formed due to the presence of specific lipids such as sphingolipids and sterols—for example, large proteins, such as bacteriorhodopsin, aggregate and create distinct domains.
Another mechanism for membrane domain formation involves membrane proteins interacting with cytoskeletal...
Another mechanism for membrane domain formation involves membrane proteins interacting with cytoskeletal...
Structure of Porins
Mitochondria, chloroplasts, and gram-negative bacteria have transmembrane, beta-barrel proteins called porins to mediate the free diffusion of ions and metabolites across the membrane. Mitochondrial porin precursors contain conserved amino acid sequences called beta signals at their C-terminal. Beta signals have a motif of PoXGXXHyXHy (Po-Polar, X-Any amino acid, G-Glycine, Hy-LargeHydrophobic), which are crucial for precursor recognition to initiate precursor assembly. Beta-barrel precursors...
Insertion of Single-pass Transmembrane Proteins in the RER
Integral membrane proteins are proteins adhered to the lipid bilayer of a cell organelle or membrane. They can be of two types: transmembrane integral proteins that span the lipid bilayer and monotopic proteins that are attached to either side of the membrane but do not pass through it.
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...

