Set3 HDAC调解了重叠的非编码转录对基因诱导动力学的影响
TaeSoo Kim1, Zhenyu Xu, Sandra Clauder-Münster
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, 240 Longwood Avenue, Boston, MA 02115, USA.
通过结合H3K4me2.2,Set3基因脱乙酶复合体 (Set3C) 微调基因表达. 叠加的非编码RNA招募Set3C来调节酵母碳源转移期间的基因诱导和抑制.
科学领域:
- 分子生物学分子生物学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 酵母遗传学 酵母遗传学
背景情况:
- 已知Set3基因组脱乙酶复合体 (Set3C) 在转录区域内结合H3K4me2并脱乙基因组.
- 了解Set3C在基因表达调节中的精确作用对于破译表观遗传控制机制至关重要.
研究的目的:
- 为了研究Set3C如何影响酵母菌的全基因组转录模式.
- 确定Set3C活动,基因素修饰和非编码RNA (ncRNA) 转录之间的关系.
主要方法:
- 在酵母菌株中进行全基因组转录分析,以改变SET3表达.
- 对基因促进体的基因基因修饰,特别是H3K4me2和H3K4me3的分析.
- 对重叠的非编码RNA转录的识别和表征.
主要成果:
- 在酵母碳源过渡期内,删除SET3显著改变了基因表达.
- 发现大量受Set3影响的基因与非编码RNA转录重叠.
- 由Set3C抑制的基因经常在促进体中表现出H3K4me2丰富,这与减少H3K4me3或ncRNA活性有关.
- 还发现Set3C通过抑制反感转录来抑制内部神秘促进体,并刺激基因表达.
结论:
- 重叠的非编码RNA转录在微调基因表达中起着关键作用.
- 该机制涉及通过H3K4me2沉积通过ncRNA介导的Set3C的招募,而不是ncRNA本身.
- Set3C作为基因表达的关键调节者,特别是在动态环境变化期间,通过与基因素修饰和ncRNAs的相互作用来起作用.
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