微处理器,Setx,Xrn2和Rrp6合作诱导RNAPII转录的过早终止
Alexandre Wagschal1, Emilie Rousset, Poornima Basavarajaiah
1Laboratoires de Virologie Moléculaire, Institut de Génétique Humaine, CNRS UPR1142, 34396 Montpellier, France.
Cell
|September 18, 2012
概括
微处理器复杂控制基因表达通过RNA干扰独立的机制. 它招募终结因子来诱导RNA聚合酶II暂停和过早的转录终止,调节细胞基因.
科学领域:
- 分子生物学分子生物学
- 基因法规 基因法规
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
背景情况:
- 转录延长是基因调节的一个关键步骤.
- 微处理器复合体在RNA干扰 (RNAi) 之外的基因表达中的作用尚未完全理解.
研究的目的:
- 研究微处理器复合体在基因表达中的RNAi独立功能.
- 阐明微处理器控制转录延长的机制.
主要方法:
- 染色体免疫沉与高通量测序 (ChIP-seq) 相结合,以识别基因标.
- 通过核糖核酶对RNA裂变和处理的分析.
主要成果:
- 微处理器招募终止因子 (Setx,Xrn2) 和Rrp6来诱导RNA聚合酶II (RNAPII) 暂停和过早终止.
- 微处理器对TARRNA的裂变启动了一条涉及Rrp6处理的途径,生成一个小RNA.
- 这种小RNA在HIV-1促进体中调解转录抑制和染色质重塑.
- ChIP-seq确定了由微处理器调节的细胞基因.
结论:
- 微处理器复合体通过RNAi独立的机制调节基因表达.
- 德罗莎/Dgcr8,Xrn2和Rrp6核核糖酶的合作作用调解RNAPII暂停和过早终止.
- 这一途径代表了RNAPII依赖转录延长的新型调节机制.
相关概念视频
Transcription Initiation
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
Transcriptional Regulation: Riboswitches
Riboswitches are RNA elements that regulate gene expression by altering their secondary structures in response to specific effector molecules. These elements, located in the leader regions of certain mRNAs, act as transcriptional regulators by toggling between alternative conformations to control downstream gene expression. Riboswitch-mediated regulation is a precise mechanism for modulating biosynthetic pathways, as exemplified by the riboflavin biosynthesis pathway in Bacillus...
Bacterial Transcription
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Eukaryotic RNA Polymerases
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
Chromatin Structure Regulates pre-mRNA Processing
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
Transcription Attenuation in Prokaryotes
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...


