朱奇尼的结构生物化学表明它是piRNA生物发生中的核酶
Jonathan J Ipsaro1, Astrid D Haase, Simon R Knott
1W. M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.
Nature
|October 16, 2012
概括
与PIWI相互作用的RNAs (piRNAs) 保护胚胎细胞基因组免受移动遗传元素的影响. 鼠标黄瓜 (mZuc) 蛋白在初级piRNA生物发生过程中作为核酶起作用,可能产生piRNA 5'端.
科学领域:
- 分子生物学分子生物学
- 遗传学 是一个遗传学.
- 生物化学 生物化学
背景情况:
- 与PIWI相互作用的RNAs (piRNAs) 对于先天性免疫至关重要,保护生殖基因组免受可移植元素的影响.
- piRNA生物发生涉及不同的途径,包括从基因组集群中产生初级piRNA.
- 主要piRNA处理背后的精确酶机制仍然不完全理解.
研究的目的:
- 为了研究小鼠祖奇尼同类 (mZuc;PLD6) 的酶活性和结构性质.
- 阐明黄瓜蛋白在初级piRNAs生物发生中的作用.
主要方法:
- 生产一个二度,溶解的碎片的小鼠祖奇尼 (mZuc).
- 生物化学测试以确定核酶活性.
- 进行X射线晶体学以确定mZuc.的3D结构.
主要成果:
- 该mZuc片段表现出单链特异性核酶活性.
- 结构分析显示,mZuc在结构上与脂酶-D家族核酶相似.
- 数据表明,黄瓜蛋白质在初级piRNA生物发生过程中作为核酶起作用.
结论:
- 鼠标祖奇尼 (mZuc/PLD6) 在初级piRNAs的处理中充当核酶.
- 这种核酶活动很可能参与产生主要piRNAs的5'末端.
- 黄瓜蛋白代表了基因组防御的piRNA途径中的关键酶.
相关概念视频
piRNA - Piwi-interacting RNAs
7.8K
PIWI-interacting RNAs, or piRNAs, are the most abundant short non-coding RNAs. More than 20,000 genes have been found in humans that code for piRNAs while only 2000 genes have been found for miRNAs. piRNAs can act at the transcriptional and post-transcriptional levels and have a vital role in silencing transposable elements present in germ cells. They are also involved in epigenetic silencing and activation. Previously, they were thought to function only in germ cells but new evidence suggests...
7.8K
RNA Interference
28.5K
RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
28.5K
Conservation of Protein Domains Over Different Proteins
15.0K
Protein domains are small structurally independent units that are part of a single amino acid chain. Although these domains are often structurally independent, they may rely on synergistic effects to perform their functions as part of a larger protein. Protein domains may be conserved within the same organism, as well as across different organisms.
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
A limited set of protein domains often duplicate and recombine during evolution. These domains can be organized in different combinations to...
15.0K
siRNA - Small Interfering RNAs
19.0K
Small interfering RNAs, or siRNAs, are short regulatory RNA molecules that can silence genes post-transcriptionally, as well as the transcriptional level in some cases. siRNAs are important for protecting cells against viral infections and silencing transposable genetic elements.
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
19.0K
Ribozymes
13.7K
The term ribozyme is used for RNA that can act as an enzyme. Ribozymes are mainly found in selected viruses, bacteria, plant organelles, and lower eukaryotes. Ribozymes were first discovered in 1982 when Tom Cech’s laboratory observed Group I introns acting as enzymes. This was shortly followed by the discovery of another ribozyme, Ribonulcease P, by Sid Altman’s laboratory. Both Cech and Altman received the Nobel Prize in chemistry in 1989 for their work on ribozymes.
Ribozymes can...
Ribozymes can...
13.7K
Experimental RNAi
8.2K
RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
8.2K


