普罗利尔异构酶SlyD是一种高效的酶,但减缓了客户蛋白质的结构折叠
Gabriel Zoldák1, Anne-Juliane Geitner, Franz X Schmid
1Laboratorium für Biochemie und Bayreuther Zentrum für Molekulare Biowissenschaften, Universität Bayreuth, D-95440 Bayreuth, Germany.
Journal of the American Chemical Society
|March 1, 2013
概括
烯基异构酶SlyD通过催化 cis/trans 烯基异构化,显著加速蛋白质折叠. 这种酶确保了快速和均的重新折叠率,无论最初的普罗林异构体状态如何.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 酶学 是一种酶学.
背景情况:
- 蛋白质折叠酶利用不同的域进行基质相互作用和催化.
- 烯基 cis/trans 异构化是许多蛋白质折叠中的速度限制步骤.
- 众所周知,来自大肠杆菌的细菌prolyl异构酶SlyD与折叠蛋白相互作用.
研究的目的:
- 研究SlyD在核糖核酶T1.1重新折叠中的催化机制.
- 为了确定SlyD如何调节基于proline同位素状态 (cis和trans) 的蛋白质折叠.
- 量化SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.SlyD.
主要方法:
- 在不同度的SlyD存在下,对核糖酶T1重新折叠的动态分析.
- 测量了prolyl cis/trans 异构化速率.
- 蛋白质与cis和trans proline异构体的重新折叠率的比较.
主要成果:
- SlyD加速了prolyl cis → trans异构化超过1万倍,达到接近100秒的速度.
- SlyD结合和催化可以通过促进跨同位素来减缓正确的cis proline同位素的蛋白质的结构折叠.
- 在足够的SlyD度 (≥1μM) 下, cis 和 trans proline异构体的重新折叠速率变得相同,因为SlyD催化均衡超越了构造折叠.
结论:
- SlyD作为prolyl cis/trans异构化的强有力的催化剂,显著影响蛋白质折叠动力学.
- 该酶的效率确保了proline异构体状态不是SlyD存在时折叠的速度决定因素.
- SlyD在结合和催化中的双重作用影响了整体蛋白质重新折叠的途径,可能通过控制proline异构化状态.
相关概念视频
Protein Folding
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Folding
Overview
Protein Folding
Overview
Molecular Chaperones and Protein Folding
The native conformation of a protein is formed by interactions between the side chains of its constituent amino acids. When the amino acids cannot form these interactions, the protein cannot fold by itself and needs chaperones. Notably, chaperones do not relay any additional information required for the folding of polypeptides; the native conformation of a protein is determined solely by its amino acid sequence. Chaperones catalyze protein folding without being a part of the folded protein.
The...
The...
Molecular Chaperones and Protein Folding
The native conformation of a protein is formed by interactions between the side chains of its constituent amino acids. When the amino acids cannot form these interactions, the protein cannot fold by itself and needs chaperones. Notably, chaperones do not relay any additional information required for the folding of polypeptides; the native conformation of a protein is determined solely by its amino acid sequence. Chaperones catalyze protein folding without being a part of the folded protein.
The...
The...
Protein and Protein Structure
Proteins are one of the most abundant organic molecules in living systems and have the most diverse range of functions of all macromolecules. Proteins may be structural, regulatory, contractile, or protective. They may serve in transport, storage, or membranes; or they may be toxins or enzymes. Their structures, like their functions, vary greatly. They are all, however, amino acid polymers arranged in a linear sequence.
A protein's shape is critical to its function. For example, an enzyme can...
A protein's shape is critical to its function. For example, an enzyme can...


