酸转移由蛋白激酶A被捕获在一个水晶格子
Adam C Bastidas1, Michael S Deal, Jon M Steichen
1Department of Pharmacology, University of California, San Diego, California 92093, USA.
Journal of the American Chemical Society
|March 6, 2013
概括
研究人员通过捕获反应中间体,阐明了cAMP依赖蛋白激酶 (PKA) 的催化机制. 他们确定离子作用和ADP释放是PKA的关键.
科学领域:
- 生物化学 生物化学
- 分子生物学分子生物学
- 结构生物学 结构生物学
背景情况:
- 在cAMP信号传递中,cAMP依赖蛋白激酶 (PKA) 是一个关键的氨酸/氨酸激酶.
- PKA 作为更广泛的激酶家族的模型酶.
- 在PKA的转移,离子作用和ADP释放中的关键步骤仍然不清楚.
研究的目的:
- 解决PKA的催化机制,包括转移和ADP释放.
- 阐明在催化过程中必不可少的离子的特定作用.
- 为了提供PKA的催化步骤的完整分辨率概况.
主要方法:
- 利用蛋白质晶体学来捕获反应中间体.
- 在缓慢转移研究中使用了腺-5'-(β,γ-imido) 三酸盐 (AMP-PNP).
- 确定了PKA基板复合物的高分辨率晶体结构 (1.55 Å和2.15 Å).
主要成果:
- 成功地在晶格中捕获了基质和产品状态.
- 观察到不同的结构状态,显示部分和完全的基转移.
- 确定Mg2是稳定结合的离子,对催化至关重要,而Mg1的驱逐与ADP释放有关.
结论:
- 这项研究为PKA.提供了完整的催化循环解析.
- 2在催化后稳定活性部位方面发挥着至关重要的作用.
- 驱逐Mg1被认为是限制ADP释放速度的关键因素.
相关概念视频
Protein Kinases and Phosphatases
Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein Kinases and Phosphatases
Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Phosphorylation
The addition or removal of phosphate groups from proteins is the most common chemical modification that regulates cellular processes. These modifications can affect the structure, activity, stability, and localization of proteins within cells as well as their interactions with other proteins.
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
During phosphorylation, protein kinases transfer the terminal phosphate group of ATP to specific amino acid side chains of substrate proteins. Serine, threonine, and tyrosine are the most commonly...
Amplifying Signals via Enzymatic Cascade
When a ligand binds to a cell-surface receptor, the receptor's intracellular domain changes shape, which may either activate its enzyme function or allow its binding to other molecules. The initial signal is amplified by most signal transduction pathways. This means that a single ligand molecule can activate multiple molecules of a downstream target. Proteins that relay a signal are most commonly phosphorylated at one or more sites, activating or inactivating the protein. Kinases catalyze the...
cAMP-dependent Protein Kinase Pathways
Cyclic Adenosine Monophosphate (cAMP) is an essential second messenger that activates protein kinase A (PKA) and regulates various biological processes. A single epinephrine molecule binds to GPCR and activates several heterotrimeric G proteins, each stimulating multiple adenylyl cyclase, amplifying the signal, and synthesizing large numbers of cAMP molecules. Small changes in cAMP concentration affect PKA activity. The binding of four cAMP molecules induces a conformational change in PKA,...
Calmodulin-dependent Signaling
Calmodulin (CaM) is a calcium-binding protein in eukaryotes that controls various calcium-regulated cellular processes. It has four calcium-binding sites that bind calcium to form the calcium-calmodulin ( Ca2+-CaM) complex. GPCR stimulation increases the calcium levels in the cells that bind to CaM and induces a conformational change.
The Ca2+-CaM complex does not have enzymatic activity by itself. Instead, the complex binds downstream target proteins, including membrane proteins or enzymes,...
The Ca2+-CaM complex does not have enzymatic activity by itself. Instead, the complex binds downstream target proteins, including membrane proteins or enzymes,...

